| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0713 |
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| Symbol | |
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| ID | 8367130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 868808 |
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| End bp | 870733 |
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| Gene Length | 1926 bp |
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| Protein Length | 641 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 644983140 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_003140832 |
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| Protein GI | 256819553 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTCAAG CACATACATA TAGTGATAGC ACTTTGGTAA ACTTAGCTAC TGCCCGTTAC
ACCCCACGTT GGATAGTGGT GTGTATGGAA GTGTTTTTGC TATTTATAGC TCTATTCTTT
TCCTTTTTTG TAGTAGAGCG CTTGGGGGTA TATATTCCTG ACAGTATTCC TCTTTACAAA
CGCTATTTAT TAGTTATCGG AGTGAACATC TTCTTTATGT TCATCTTCCG TACTTATTCA
GGGATTATAC GGTATTCTAC TTTTAGAGAT TTGTTTCGCA TTCTGCTTTC AAGTGGGTGC
ACGGTAATAG CAATGTTTAT TGCCAACAAG ATAAGTCTGC ACGTTATAGG CGAAAAAGTG
TTGTTGAACC CTATTCTACT GATATATTTT ACAGTGTCGT TCATCATACT ATTCGTATTT
AGGTTATCGG TAAAAGAGTT TTTCTATTTG GTAAAAGAAA TTAATAGACG TACTTCTAAG
AGGCGTATTC TTATCTTGGG GATAGATGAT GAAGCAGTTG CTTTTGCCAA TGGGATTATA
GGCAATGCTG CGATTCCTTA TTCGGTAGTA GGTTTCCTTA CAGGGCGCAC GAATCCTAAA
CAGGCTACAC TATTGGGTAG ACCTATTATC TCAAAAGATA AATTTATAGA TACTCCTTGT
GAAGAATTAG AGGCTGATGG GGTGCTCATA AACAAGAATC ATCTTTCGAA AGAAGAGATG
ACTTTTTGGG TGAATGTGTG TTTAGACAAA GGTTTACAAA TACTCAAAAC CCCCGCATTA
CAGAAATTAC GTCCAGAAAA AGAAGGATTT AATCTTCATA AAATACAAAT AGAAGACCTA
TTAGGGCGTA GACAGATAGT ATTAGATAAC GAAGAAGTAC GAGAAAAACA CTATCACAAA
AATATATTAG TAACAGGAGG AGCAGGGTCT ATTGGTAGTG AGTTGATACG ACAGATAGCT
ACCTTCACCC CTGCCTTAGT AGTTGTGCTC GACCAAGCAG AAACGCCTCT ATACGACATA
GAGTTAGAAC TTAAAGAGTG TTTCCCAGAC ATTGCTTTTG AGTTTGTTTT AGCCGATATT
ACTAACTGTG AACGTTTAGA AAGTGTGTTT AAAGCACATA AGTTTTCAGT AGTGTATCAC
GCGGCTGCCT ATAAGCACGT ACCGATGATA GAAGAGAATC CGCACGAAGC TGTGTTAGTA
AACATACAAG GGACTAAAAA TGTAGCACTT TTGGCTAACA AATATGAAGT ACCTCACTTT
GTGATGATAT CCACTGATAA AGCTGTAAAC CCCACCAATG TAATGGGAGC TTCAAAGAGG
GTGGCAGAGC TTTTTGTACA AGCCTTACAA AACAAAGAAG GCAATAAAAC AGCTTTTATC
ACTACTCGTT TTGGCAATGT GTTGGGCTCT AATGGGTCGG TAATCCCCCA TTTTAGGAAA
CAGATAGAAA AAGGAGGTCC TGTAACCATC ACCCACCCTG ATATAGTACG CTACTTTATG
ACTATACCCG AAGCGTGTGA GTTGGTGCTT CAAGCAGGGA CTATGGGCAA AGGTGGCGAG
ATATTTGTTT TTGATATGGG TGAACCCGTG AAGATACTCA ACCTTGCTAC TCGTATGATT
AAACTATCAG GCTATGAACC AAACGTAGAT ATCAAGCTCG TGTACACAGG TTTGCGACCT
GGTGAGAAAC TCTATGAAGA ATTATTAAGT GACAGTACTA AAACAATGCC TACGCACCAT
AAGAAAATAA TGATTAGCAA AGACCCTTCA ATGTCGTTTA CTGAGATAGA GGCACTCACT
ACCCAAATAT ATAAAGTAGC TACACAAGGC GATAAGAGAG AAGTAGTGCG TTTATTAAAA
CAAATAGTGA AGGAGTTTAA AAGCAATAAC TCCGAATATG AAACCTTAGA TAAGAAAATA
GAATGA
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| Protein sequence | MPQAHTYSDS TLVNLATARY TPRWIVVCME VFLLFIALFF SFFVVERLGV YIPDSIPLYK
RYLLVIGVNI FFMFIFRTYS GIIRYSTFRD LFRILLSSGC TVIAMFIANK ISLHVIGEKV
LLNPILLIYF TVSFIILFVF RLSVKEFFYL VKEINRRTSK RRILILGIDD EAVAFANGII
GNAAIPYSVV GFLTGRTNPK QATLLGRPII SKDKFIDTPC EELEADGVLI NKNHLSKEEM
TFWVNVCLDK GLQILKTPAL QKLRPEKEGF NLHKIQIEDL LGRRQIVLDN EEVREKHYHK
NILVTGGAGS IGSELIRQIA TFTPALVVVL DQAETPLYDI ELELKECFPD IAFEFVLADI
TNCERLESVF KAHKFSVVYH AAAYKHVPMI EENPHEAVLV NIQGTKNVAL LANKYEVPHF
VMISTDKAVN PTNVMGASKR VAELFVQALQ NKEGNKTAFI TTRFGNVLGS NGSVIPHFRK
QIEKGGPVTI THPDIVRYFM TIPEACELVL QAGTMGKGGE IFVFDMGEPV KILNLATRMI
KLSGYEPNVD IKLVYTGLRP GEKLYEELLS DSTKTMPTHH KKIMISKDPS MSFTEIEALT
TQIYKVATQG DKREVVRLLK QIVKEFKSNN SEYETLDKKI E
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