Gene Coch_0700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0700 
Symbol 
ID8367117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand- 
Start bp857194 
End bp858294 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content32% 
IMG OID644983127 
Producthypothetical protein 
Protein accessionYP_003140819 
Protein GI256819540 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3754] Lipopolysaccharide biosynthesis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAATA AAGAAAAAAA ATATAGGGCT ATTGCTTTTT ACTTACCACA ATATCATCCT 
ATTCCTGAAA ATGATGAATG GTGGGGAAAG GGTTTTACAG AATGGACAAA CGTAGGAAGG 
GCTAAAAAAC TATTTAGAGG ACACTATCAA CCTCGTGTTC CTGCAGATTT AGGCTATTAT 
GATTTGCGAC TCCCTGAAAT AAGAGAAGCA CAAGCTCAAA TGGCAAAAGA AGCTGGTATA 
GAAGGTTTTT GTTATTATCA CTATTGGTTT GGAAATGGGA AACGTCTATT AGAACGTCCT 
TTTGACGAGG TAGTGAAGTT AGGAAAACCT GATTTCCCTT TTATGTTGTG CTGGGCAAAT 
GAAAGTTGGC ACGCTAAATT TTGGGATGTA AATGGAGTTT CAAGCAAAAA AACACTTATT 
GAACAAAAAT ATGACAAAAG TGATTGGGAG CTACATTTCC AAACTCTTTT GCCTGCATTT 
AAAGATCATA GATATATCCA AATAGAAGGG AAGCCAGCTT TTATGATTTA TAAACCATTT 
GACTTTATAA ATATTAATGA GTTTATCGCT TTTTGGCAGG AATTGGCAAA AAAAAACGGC 
CTAAAAGGCA TTTATTTTAT AGGACAGCTA ACAAATATTG ATAAACAACT TGAAGCAATA 
AAAGAAATTA CAATAGATGG CTTCAACTCC TTAAGAATGT GGAACTATAG TCTCAATAGA 
AGCTTTATAG AAAGAGCATA TAGAAAGATT TACAGAAAGA TTTTTTCTGT ACCTGATATT 
GTAGATTACT CAAAAATCTA CAAAAGTTTT ATTACTCCAT TGGAAGCTCA AGAAAATATT 
TTTCCAACAA TAATTCCTAA TTGGGATCAT ACTCCTAGAA GTGGGAAGGG TGGAACAGTA 
TTTAAAAATA CTAATGGAGA GAACTTTAAA CAACATGTAA TGGAAGTATT GAAAATAATT 
TCACAAAAGG AATATGATAA AAGGATTGTA TTCATAAAAT CATGGAATGA ATGGGGAGAG 
GGAAACTATT TAGAACCAGA TTTGAAAAAT GGATATTTAT ACTTAGATAT ATTGCAAGAA 
CTATTAGTTT CTCAAAAATA G
 
Protein sequence
MENKEKKYRA IAFYLPQYHP IPENDEWWGK GFTEWTNVGR AKKLFRGHYQ PRVPADLGYY 
DLRLPEIREA QAQMAKEAGI EGFCYYHYWF GNGKRLLERP FDEVVKLGKP DFPFMLCWAN 
ESWHAKFWDV NGVSSKKTLI EQKYDKSDWE LHFQTLLPAF KDHRYIQIEG KPAFMIYKPF 
DFININEFIA FWQELAKKNG LKGIYFIGQL TNIDKQLEAI KEITIDGFNS LRMWNYSLNR 
SFIERAYRKI YRKIFSVPDI VDYSKIYKSF ITPLEAQENI FPTIIPNWDH TPRSGKGGTV 
FKNTNGENFK QHVMEVLKII SQKEYDKRIV FIKSWNEWGE GNYLEPDLKN GYLYLDILQE 
LLVSQK