| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0687 |
|---|
| Symbol | |
|---|
| ID | 8367104 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | + |
|---|
| Start bp | 841741 |
|---|
| End bp | 842757 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 644983114 |
|---|
| Product | glycosidase PH1107-related |
|---|
| Protein accession | YP_003140806 |
|---|
| Protein GI | 256819527 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2152] Predicted glycosylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTGA TGAATATTTT AAAAAATTTA ATAACTAAAA CAAAAATAAT GAGTCAAAAA
ATTCCTTGGC AAGAACGCCC TGCGGGTTGT ACCGATGTAA TGTGGCGTTA TTCTGAAAAC
CCTATTATCG GTAGGTATGA TATCCCTACC TCTAACAGTA TTTTTAACTC GGCTGTTGTG
CCTTTTGGCG ACGGCTATGC AGGGGTTTTC CGTTGCGACA ACAAAGCAGT GCAAATGAAC
ATCTTCGCTG GATTCAGTAA AGATGCTATT CACTGGGAAA TCAACCACGA ACCTATCGTG
ATGAAAGGTG GTAATACTGA TTTCTTACAT TCTGAATATA AGTACGACCC TCGCGTAACG
TTTATTGAAG ACCGCTATTG GGTAACTTGG TGTAATGGCT ATTGTGGTCC TACTATTGGG
ATTGCTTATA CTTTTGATTT CAAAGAGTTT TTCCAATGCG AGAATGCCTT TTTGCCTTTC
AACCGCAACG GAGTGCTCTT CCCTGAGAAA ATCAACGGTA AATACGCAAT GCTTAGCCGT
CCAAGTGATA ACGGACATAC ACCTTTCGGT GATATTTTCA TCAGCTATAG CCCCGATATG
AAATACTGGG GTGAACACCG CTGTGTGATG AAAGTAACGC CTTTTATAGA TAGCGCTTGG
CAATGTACCA AAATAGGGGC AGGAGCCGTG CCTATCAAAA CAAAAGACGG ATGGCTATTG
TTCTATCACG GGGTAATCAA CACTTGCAAC GGTTTCCGCT ACTCTATGGG GGCTGCACTA
TTAGACCTCA ACGATCCAAG CAAGGTAATT GCTCGTACAC AGCCTTACCT CTTGGCACCT
GCAACTCTCT ACGAAACTAC CGGCGATGTG CCTAATGTGG TATTCCCTTG TGCTGCCTTG
CATTCTATCG AAGAAGACAA AGTAGCAGTG TACTACGGTG CTGCCGATAC AGTAGTGGGC
GTTGCCTTCG GACGTATTTC CGAAATCGTA AAATTCACTA AAGAAAACTC ATTGTAA
|
|---|
| Protein sequence | MKLMNILKNL ITKTKIMSQK IPWQERPAGC TDVMWRYSEN PIIGRYDIPT SNSIFNSAVV
PFGDGYAGVF RCDNKAVQMN IFAGFSKDAI HWEINHEPIV MKGGNTDFLH SEYKYDPRVT
FIEDRYWVTW CNGYCGPTIG IAYTFDFKEF FQCENAFLPF NRNGVLFPEK INGKYAMLSR
PSDNGHTPFG DIFISYSPDM KYWGEHRCVM KVTPFIDSAW QCTKIGAGAV PIKTKDGWLL
FYHGVINTCN GFRYSMGAAL LDLNDPSKVI ARTQPYLLAP ATLYETTGDV PNVVFPCAAL
HSIEEDKVAV YYGAADTVVG VAFGRISEIV KFTKENSL
|
|---|
| |