Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0680 |
Symbol | |
ID | 8367097 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 836107 |
End bp | 837021 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 644983107 |
Product | restriction endonuclease |
Protein accession | YP_003140799 |
Protein GI | 256819520 |
COG category | [V] Defense mechanisms |
COG ID | [COG1715] Restriction endonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCATTAC CTGATTTCCA ATCCTTTTTT TATCCTACTT TTTTAATGAT AAAAGATAAA AAGGAGTATT CTATAGATGA GCTAAGAAAC TTCTTAACAA AGTATTTTAA ATTAACGGAG GATGATAAAT CTGAAAAAGT ACCAAGTGGT ACTCAAACAA AATTCAACAA TCGAATTTAT TGGACAAAAA GTTATTTTAC AAAAGCAAAT CTTATAGAAT CTACTAAACG ATCTCATTTT AAGATTACTA AAAAAGGTGT TGAGTTCTTT AATAAGTTAG AAAACAACAA AAAAATCACA ATTAAGGATT TAGAGAATAT TCCTGAATTC CATAGTTTTA AGTATGGAGA TTCTTTAAAT CAATTAAGTA TAGAAGAAAA TCTAATAGAA GATAAAACAC CTTTTGAAAG ACTAGAAGAT ATTCATCAGC TGTTACAAGA TGAATTAGCT CATGAGTTAT TGATAAAGGT TCGTGAAAAT TCTTGGCAAT TCTTTGAAGA TTTAGTTATA GACCTAATGG TAAAAATGGG ATATGGAGGA GCAAAAAGTA GAAAAGGAAA TTCTGTAAAA AGAACAAATG ATGAAGGAAT AGATGGCATA ATTAATGAAG ATAAGTTAGG GTTAGAACTT ATCTATCTAC AAGCTAAAAA ATGGGATACA GAAACTACAA TAGGAAGACC TGAAGTTCAA AAGTTTGTAG GAGCTTTACA TGGACAAAGA GCAAAAAAAG GAGTTTTTAT CACAACAAGT AAATTTTCCG ATAATGCTTA TGAATATGTG AAGACAATTG ATCCAAAAGT TGTTCTTATT GATGGAAAAA CGCTTACTAA ACTTATGATT GAATATGAAA TAGGAACAAC AGTTGTAGAA AATTATCAGG TGAAAAAAAT TGATACTGAT TACTTTGAAA AATAA
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Protein sequence | MALPDFQSFF YPTFLMIKDK KEYSIDELRN FLTKYFKLTE DDKSEKVPSG TQTKFNNRIY WTKSYFTKAN LIESTKRSHF KITKKGVEFF NKLENNKKIT IKDLENIPEF HSFKYGDSLN QLSIEENLIE DKTPFERLED IHQLLQDELA HELLIKVREN SWQFFEDLVI DLMVKMGYGG AKSRKGNSVK RTNDEGIDGI INEDKLGLEL IYLQAKKWDT ETTIGRPEVQ KFVGALHGQR AKKGVFITTS KFSDNAYEYV KTIDPKVVLI DGKTLTKLMI EYEIGTTVVE NYQVKKIDTD YFEK
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