Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0674 |
Symbol | |
ID | 8367091 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 830133 |
End bp | 831098 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644983101 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003140793 |
Protein GI | 256819514 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATGA TAAACGAAAT AACATTACCT TTGGCAACCA ACGAAGAAGA GGTGCAAAAT TATTACGAAA GAGTGAATGA ACAAATAGGG GTGTTCCGAT TGGAACAACA AACCTTAGGC AATCATACTT ACTACCGATG GCTAGCACAA ATGAAAGAAG ATGTGGCTTT TGAGGGAGGT ATGGATATCC CCTCAGTGCG TCTTTATTTC GTAACCCGAA CCCACAAAGG TATGACGGTG CAGGTAGATG GGCAAAATTG TTTCAGTAAG GCGGGGACTC ACAATATCTT TTTTGGTAAA GAAGAATGCT TGGGCAAAGA CTTGTTGCAT AAAGGTGATA TTATAGAAGT GATTACGGTT GCTATCAGTG CTGAGCAATT TGCACAAATA GCTACCCAAT ACCCCGAAAC TTTTATGGCG TGGTACCAGC GCTATGAGCG AGGAGGTAAC TTTATTCTTT CGCCTGAACA ATCACTTCCT ACTGACTTTG CTATGCAAAC TGTTCTTGAC CAACTGCAAC ACGCTTCTCT TTTGGGCAAG GCAGCACGAC CTTATGCCGA CCTAAAAGTG CAGGAACTCT TTTTGTTACA ATTACATCAA TACGAACAGC AACAGCTACA AGTATACCAA TACTGCAAAA CCCAAACCGA CGTACGAAAG ATGTACGAAG TGCGCGACCG CCTTACGGCT CAGTTGGACG TTACGCCTTC GATAGCTGAA CTGGCACGTG CCGTAGGTGT GAACGAAAAG AAGTTGTGTT ATGGTTTTAA AGAGGTATTT GGCACTACTG TTTTTGGTTA TCTATACGAC TATAAAATGG AATTGGCACA ACAACTGCTC CTTCACACCG ATAAGAGTAT AGGTGAAATT GCCCTCACCT GTGGGTATGA TTATATATCG CATTTTTCGA CTGCCTTTAA GAAGAAGTTT GGTAGAAATG CAAAGGAGGT AAGAAATAAG AGGTAA
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Protein sequence | MNMINEITLP LATNEEEVQN YYERVNEQIG VFRLEQQTLG NHTYYRWLAQ MKEDVAFEGG MDIPSVRLYF VTRTHKGMTV QVDGQNCFSK AGTHNIFFGK EECLGKDLLH KGDIIEVITV AISAEQFAQI ATQYPETFMA WYQRYERGGN FILSPEQSLP TDFAMQTVLD QLQHASLLGK AARPYADLKV QELFLLQLHQ YEQQQLQVYQ YCKTQTDVRK MYEVRDRLTA QLDVTPSIAE LARAVGVNEK KLCYGFKEVF GTTVFGYLYD YKMELAQQLL LHTDKSIGEI ALTCGYDYIS HFSTAFKKKF GRNAKEVRNK R
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