Gene Coch_0662 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0662 
Symbol 
ID8367079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp814295 
End bp815356 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content47% 
IMG OID644983089 
ProductDNA-directed DNA polymerase 
Protein accessionYP_003140781 
Protein GI256819502 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGCCT TCTATGCTTC GGTAGAACAG CTCGACTACC CCGAACTGCG TGGGAAAGCA 
ATTGCAGTAG GCGGAGGGGA ACCACGCGGT GTGGTAGCTA CTGCCAGCTA CGAGGCGCGC
AAGTTTGGGG TGCGCAGTGC TATCAGTGGG GCACAAGCGC GCAAACTGTG TCCACATCTC
ATTTTTGTAA AACCTCGATT CGAGCGCTAC AAGCAAATAT CGATGCAAAT ACGCGCTATT
TTCCACGAAT ATACTGATTT GGTCGAACCT CTTTCCCTTG ATGAAGCTTA CTTAGACGTA
ACCGTAAACA AAAAGAGCAA CCCTTCGGCT ACCCTTATCG CCCAAGAGAT TCGCCAACGC
ATCTTCCAAC AAACCGGACT CACGGCTTCG GCAGGCATTT CGGTAAATAA GTTTATCGCT
AAAATCGCTA GCGACTACCG TAAGCCCAAC GGACAAACCA CCATCACCGA AGCCGAAGTG
CAAGATTTTT TAGACAGACT CGATGTGCGC AAGTTCTACG GCATAGGCAA AGTAACAGCC
GAGAAGATGT ACCAGCTGGG GATATTTAAA GGAAGGGACT TGCGCGAGAA ATCATTGGAG
TTCTTAGAGC GGAATTTTGG TAATAGCGGT CATTATTACT ACGAACTCTC ACGAGGCATT
CACCGCAGTG AGGTACAACC TTTCAGAATA CGCAAATCAG TAGGTGCAGA AGAAACTTTT
CCCGAGAACC TTACTAGCGA GGTGTATATG CTACGCGAAC TCGACCATAT AGCCGAAGAC
GTAGCCCGTC GTCTCGACAA ACAGCAAGTA GCTGGCAAAA CCGTTACCCT GAAAATCAAA
TACAGTAACT TTACGGTGCA AACGCGCAGT AAAACCCTTA AAGATTTCAT AAGTAGTAAA
GACGACATAC TCTTGCACAT CAAAGAACTG CTCTATCAAG AACGCCCTGC CGAATCAGTA
CGACTCTTAG GTATCTCGCT TTCTCATCTC AACAACGAAC CCGAAAAAGA AGAAGTAAAG
AAGCCAATGT ACATACAACT AAAACTAGAA TTCCCAGATT GA
 
Protein sequence
MDAFYASVEQ LDYPELRGKA IAVGGGEPRG VVATASYEAR KFGVRSAISG AQARKLCPHL 
IFVKPRFERY KQISMQIRAI FHEYTDLVEP LSLDEAYLDV TVNKKSNPSA TLIAQEIRQR
IFQQTGLTAS AGISVNKFIA KIASDYRKPN GQTTITEAEV QDFLDRLDVR KFYGIGKVTA
EKMYQLGIFK GRDLREKSLE FLERNFGNSG HYYYELSRGI HRSEVQPFRI RKSVGAEETF
PENLTSEVYM LRELDHIAED VARRLDKQQV AGKTVTLKIK YSNFTVQTRS KTLKDFISSK
DDILLHIKEL LYQERPAESV RLLGISLSHL NNEPEKEEVK KPMYIQLKLE FPD