Gene Coch_0656 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0656 
Symbol 
ID8367073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand+ 
Start bp808418 
End bp809386 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content46% 
IMG OID644983083 
Producttryptophanyl-tRNA synthetase 
Protein accessionYP_003140775 
Protein GI256819496 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0180] Tryptophanyl-tRNA synthetase 
TIGRFAM ID[TIGR00233] tryptophanyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.368558 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCGTG TATTAACAGG CATTCAAAGT ACAGGTACTC CCCACTTAGG AAATATCCTC 
GGAGCAATCC TCCCAGCAGT GCAAATGGCA TCAGACCCTT CTAACGAATC GTTTCTGTTC 
ATCGCCGATA TGCACTCCCT TACTCAAATA AAAGACGGTG CGCAACTCCG CGCCAACACT 
TATAGCGTTG CTGCCACTTG GTTGGCTTTC GGTTTAGATA CTGATAAAGT AACCTTCTAC 
CGCCAGAGCG ACGTACCCCA AACCGCTGAA CTCTCGTGGT ACTTGGCTTG TTTTTTCCCT 
TACCAACGCC TCACCCTCGC CCATTCGTTT AAAGACAAAA TGGACTACCT GCAAGACGTA 
AATGCTGGGC TCTTCACTTA CCCTATGCTA ATGGCAGCCG ACATACTCTT GTATGATGCT 
GAGGTCGTAC CTGTGGGCAA AGACCAGTTG CAACACCTCG AAATTACCCG CGATGTAGCT 
TCTCGTTTCA ATCACCAAAT GGGCGAAACT TTCGTATTGC CACAAGCTAA AATAGAGGAG 
AAAATAATGA TTATACCAGG TACCGACGGC GAAAAGATGA GCAAGTCACG CAACAATTTC 
ATCAATATTT TCTTGCCCGA AAAACAACTC CGCAAGCAAA TAATGGCAAT CCAAACCGAT 
AGTACTCCTT TGGAAGCTCC CAAAGACCCC GATACTTGCA ACGTGATGAG GCTCTACCGC 
CTGTTAGCTT CTCCTGAGCA AATACAAGCA ATGGAAGAGG CTTACCGTGC AGGAGGTTAT 
GGCTTCGGTC AAGCCAAACA AACCCTTTAC GAACTGATAT TAGAAAAATT TGCTACCCCA 
CGCGAGCGCT ACGTTTACTA TATGGAGCAT TTAAGCGAAC TCGATGCTAT ATTAAAAGAA 
GGTGCTGCCA AAGCACACCG CGTAGCCGAT GAAACTTTGC GCAGGGTACG CACCAAAATA 
GGATATTAA
 
Protein sequence
MARVLTGIQS TGTPHLGNIL GAILPAVQMA SDPSNESFLF IADMHSLTQI KDGAQLRANT 
YSVAATWLAF GLDTDKVTFY RQSDVPQTAE LSWYLACFFP YQRLTLAHSF KDKMDYLQDV 
NAGLFTYPML MAADILLYDA EVVPVGKDQL QHLEITRDVA SRFNHQMGET FVLPQAKIEE 
KIMIIPGTDG EKMSKSRNNF INIFLPEKQL RKQIMAIQTD STPLEAPKDP DTCNVMRLYR 
LLASPEQIQA MEEAYRAGGY GFGQAKQTLY ELILEKFATP RERYVYYMEH LSELDAILKE 
GAAKAHRVAD ETLRRVRTKI GY