| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0628 |
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| Symbol | |
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| ID | 8367045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 784481 |
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| End bp | 787408 |
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| Gene Length | 2928 bp |
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| Protein Length | 975 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644983055 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003140747 |
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| Protein GI | 256819468 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTAA AAATGAACAA ACTACTTTGT ACAGTAATGT TTTTCTTGTG CGTAGCTTTT
GGTTATGCAC AGCAAATCAC TGTAAAAGGA ACAGTGAAAG ACGGCTCTGG ACAACCTTTG
ATGGGTGCCA GTGTGCTTGT GAAAGGTACC TCTCACGGTA CTGCTGCCGA TTTTGACGGT
AATTTTGAGT TAAAAGTAGA CAAAGGGGTT ACCCTTGTGG TCTCATCAGT AGGCTATAAA
AGCCGAGAAG TAGCTGCTAA AGCAGGTACT ATGAACATTG TTCTCCAAGA GGATACACAA
CAATTGGAAG ACGTGGTAGT CATTGGGTAT GGAGCTATAA AGAAAAAAGA CCTTACAGGT
TCTGTAAACT TGGTAACCGA CAAGGACTTT AACAAAGCTC CTGCCGTAAA TGCCGACCAG
CTTATCCAAG GTAAAATAGC TGGGGTACAA ATGACCTCTG CTAGTGGAGC TCCTGGTGAA
GGACAAACTA TCCGTATCCG TGGTAATGGC TCTTTGTCCT TAACTTCTAA CCCGCTAATT
GTAATTGACG GTGTGCCAAT GAACGATGGA GGCGTGGGCG GTTCTCGTAG TATCTTCAAC
TCTATCAACC CCGAAGATAT TGAGAGTATG ACCGTGCTAA AAGACGCTTC GTCTACCGCT
ATCTTTGGTT CACGTGCTGC CAATGGGGTT ATTATGATTA CCACCAAAAA AGGAAAAGCA
AACCAAGATT TGAAGATTAG CTTCAATACT AGCATCGCCC TACAAGATGT AAACGACTAT
GTAGATGTAA TGAATGCTAA CCAATTCCGC CAAACAGTAA AAGGATTGAA TAACCCTGCT
GCCGAAGCGC TCTTAGGAAA TGCCGATACT AATTGGCAAA AAGAAATCTA CCAAACTGCT
CCAATGAGCA ATAGTACTTT GGTGCTCTCC GGCGCTTACA AAACTTTGCC TTACCGTGTA
TCAGTAGGAC ATTCGTATGC TGACGGGGTA TTGCGCACCG ATAACTTCAA ACGTACCAAT
GCCAAAATTA GCTTAAACCC TACTTTCTTT GATAAATCAT TGAAATTAGA ATTGAATGCC
AATGGTACTT ATATGCAAAA CCGTTTTGCT AATAAAGATG CTATTGGGGC AGCCGTAGAG
TACGACCCTA CTCAGTCAGT GTTTGGAGGT CTCGCTAAAT ACGGAGGTTA CCACGCTTGG
GTGAACCCTA ATAATGGCAG TCGCTACGAC TTAGCTCCTA ACAACCCTAT GGCAATGCTA
AAGTTTTTAG ACGATTCTTC TAAAGTGTAT CGTTTTATTG GGAATGCCAA AGTAGATTAT
ACCTTGCCTT TCTTTAAAGA TATTACCGCT AGTGTAAACG TGGGTATTGA TTACAGTAAA
GGGGAAGGTG ATAAAATAAC CGACCGCCGT ATGCCTACCT CTACTCCTGA TTTCGACGGA
GCTAAAACTA CTTATACTAA TAAAGCTACC AACAAGCTCT TTGATGCCTA TATAAACTAT
ATGAAAGACA TCAAAGAAAC TCATAATATA GGGCTAATGA TAGGACACTC TTATCAGTCA
TTTGAGTTTG ACGATAATTC CACTGATTAC TCTTACTTCA CTAACCCAGG TGATAACAAA
GAGGTGCCTA ACATCAACAA GAGTAGAAAC GTATTGATGT CTTTCTTTGG TCGTGCAAAC
TATAGCTATA AGAATCGTTA CCTTCTTACC GCTACCCTTC GTGCCGACGC ATCTTCTAAA
CTAAACCCAG ACGACCGTTG GGGTTACTTC CCTTCAGTAG CCTTGGCTTG GAACGTGAGC
AACGAGAACT TCCTTAAAGA CAACAAAACT CTTAACGAAC TCAAACTGCG TTTTGGTTAT
GGTGAAGTAG GGAACGTGAA TGGTTTGGGC GACTACCTCT TCCTTACCAA TTACACTCGT
AGTCAAGACG GAGCTTCTTA TCAATTGGGC GATAGCTTCT ATCAAACTTA CCGTCCTGGG
GTAACCAATA AAAACCTACG TTGGGAAGTG GGGAATACCC TCAATGCTGG TATTGATTTT
GGCTTCTTAG ACAACCTCAT CACAGGTACC CTCGATGTGT ATCGCAAACA AACCAAAGAC
CTGATAGCTG AAACCACTAT CGACCCCTTT ACCAACTTTA AAAACCGTGT AAATGCCAAT
GTAGGGGATA TGGAAAACAA AGGTATTGAA CTTGGTTTGA CCGTAACTCC TATCCGTAAT
ATTGAGAAGA ATATCCGTTG GAGTTTCAAC TATAACATAG CTTACAACGA AAATAAGATT
ACCCGTATGC CCGACGACCA GCCTACTGGA GGTATCTCAG GAGGTACTGG TAACCGTGTA
CAACTACACC GCGAAGGTGA AACCCCTTAC TCTTTCTTTG TATACCAACA AGTGTACGAC
GCACAAGGCA ATCCAGTAGA AAATGCTTTT GTAGATAGAA ACGGTAATGG CAAAATAGAC
GAAGGCGACC GCTACTTGTA CAAATCGCCT TTTGCCCCTG TGACAATGGG CTTTGGTACC
GATTTGAACT ACAAGAATTG GGATTTAAAC ATCACTACCC GTGCAAACAT CGGTAACTAT
GTGTACAATA ACACCCAATC ACGCTTAGAC CAATTCGGCG AAATTACTGC TAACAGTGGT
TTCTTGCGCA ATATTAAAGC GAATAGTAAT TTCCAACGCC ATAACGACCA ATCGTGGTTA
AGCGATTACT ACTTAGAGAA CGCTTCATTC TTCAAGTTAG ACAATATCAC CTTGGGATAT
ACTTTCCCTC ATACCGATAA AATGTACATT CGCCTCTATG GTACAGTGCA AAATGTATTG
ACTATTACTA AGTACAGCGG TTTAGACCCA GAAGTATATG GCGGTATCGA CAACAACTTC
TATCCACGCC CTCAAACTTA CTTGTTGGGC TTGAATGTTA ACTTTTAA
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| Protein sequence | MKVKMNKLLC TVMFFLCVAF GYAQQITVKG TVKDGSGQPL MGASVLVKGT SHGTAADFDG
NFELKVDKGV TLVVSSVGYK SREVAAKAGT MNIVLQEDTQ QLEDVVVIGY GAIKKKDLTG
SVNLVTDKDF NKAPAVNADQ LIQGKIAGVQ MTSASGAPGE GQTIRIRGNG SLSLTSNPLI
VIDGVPMNDG GVGGSRSIFN SINPEDIESM TVLKDASSTA IFGSRAANGV IMITTKKGKA
NQDLKISFNT SIALQDVNDY VDVMNANQFR QTVKGLNNPA AEALLGNADT NWQKEIYQTA
PMSNSTLVLS GAYKTLPYRV SVGHSYADGV LRTDNFKRTN AKISLNPTFF DKSLKLELNA
NGTYMQNRFA NKDAIGAAVE YDPTQSVFGG LAKYGGYHAW VNPNNGSRYD LAPNNPMAML
KFLDDSSKVY RFIGNAKVDY TLPFFKDITA SVNVGIDYSK GEGDKITDRR MPTSTPDFDG
AKTTYTNKAT NKLFDAYINY MKDIKETHNI GLMIGHSYQS FEFDDNSTDY SYFTNPGDNK
EVPNINKSRN VLMSFFGRAN YSYKNRYLLT ATLRADASSK LNPDDRWGYF PSVALAWNVS
NENFLKDNKT LNELKLRFGY GEVGNVNGLG DYLFLTNYTR SQDGASYQLG DSFYQTYRPG
VTNKNLRWEV GNTLNAGIDF GFLDNLITGT LDVYRKQTKD LIAETTIDPF TNFKNRVNAN
VGDMENKGIE LGLTVTPIRN IEKNIRWSFN YNIAYNENKI TRMPDDQPTG GISGGTGNRV
QLHREGETPY SFFVYQQVYD AQGNPVENAF VDRNGNGKID EGDRYLYKSP FAPVTMGFGT
DLNYKNWDLN ITTRANIGNY VYNNTQSRLD QFGEITANSG FLRNIKANSN FQRHNDQSWL
SDYYLENASF FKLDNITLGY TFPHTDKMYI RLYGTVQNVL TITKYSGLDP EVYGGIDNNF
YPRPQTYLLG LNVNF
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