| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0621 |
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| Symbol | |
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| ID | 8367038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 773675 |
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| End bp | 775816 |
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| Gene Length | 2142 bp |
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| Protein Length | 713 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644983048 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003140740 |
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| Protein GI | 256819461 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTTTAT CACCTAAAAA TATAATCCTT TTACTCACTT CTTTTTGTGC AACTCAACTC
TTCTCTCAAC CTGTAGATGA AGAAGTTACG CAACTCAGTG AGGTTGTGCT CACAGGGCAA
TCACCTATCA AGCAAGTCCA AAAAGCAGCT TACAACGTGG TTGCTATCGA AGCTCAACAG
CTCCGCAATC TCAACAGCAA TGCTGCCGAT ATGCTTGCTC GTGTATCGGG GGTGAAGATG
CGCGAAACTG GTGGAGTTGG GGCAGAGACA GCAATCAATC TTAATGGCTT TACCGGTCGT
CACGTGCGTA TCTTTATCGA TGGGGTACCT ATGAACGAAG CTAATGCCTC TTTTCGCATT
AATAATATTC CCGCTGAACT TATCGAACGT ATTGAAATTT ACAAAGGTGT GGTGCCTGTT
ACTTTTGGTG CCGATGCTCT TGGGGGCGCT ATCAATGTAG TAACGCGCAA AAGCCGATAC
AACTACGGCA ATCTATCCTA TACTTTTGGT TCTTTCAATA CCCATAAAAG TACCTTAAAC
CTCGGGCAAT TCCTCACCGA TAACATCAGT GTAGAACTCA ATGCTTACCA AAATTACTCC
GATAACAGCT ATAAAGTATT TACCGAATAT CTCGACCTCC AAACAGGCTC TTACTCTAAA
GAAAAACGTT GGTTCAAACG CTTTCACGAC CGTTATCACA ACGAGGCTAT CATAGGTCGT
GTGAATATCT TCGATGAAAA ATGGGCTGAT AAACTTTCTT TTGCGCTCAA TTATAGTCAA
GAGGATAAAC AACTCCAAAA CGCCAACCTA ATGCAAAAAG TCTTCGGAGG TAAGTACCGC
AAATCTCATA ACTATTCATC TTCAGTAGAA TATGAGAAAA AGAATATCCT CAACGGTCTC
TCTTTCTTCC TTACAGGGCG TTATGATTTT ACCACCACTC AGAATGTAGA TGAAGAAGCC
CGCCGTTATA GCTGGACGGG TGAGTATGAA CCAATGGTTA CTCGTGGTGA ATCGCAACTT
CAGAATACCA TTTTTGAAGG TAAAACGGGC TATATTACTT CACACTTAGA CTATCAACTC
AATGAAAAAC ACTCCTTTCA ACTCACACAC ACCTTCAGTA ATTACACTCG GCGTAACAAA
AATATGCTCA TTACCAACTA TACCCTCGAT TCCGATTTTA TGAGGCGTGT CAATGAGAAA
AATATTTCTG GATTATCATA TAAGTTCACC CCCTCCGAGC GTTGGAATAT ATTAGCTTTC
GGTAAATATT ACAATACAGC TGTAACAGGT CCAGTGATTG TTAGTGGATA TGGAAGTCGC
GCGGTATATG AAGAAGAAAC TCATCACACT CAGGCTTGGG GGTATGGTGG GGCGACTACT
TATCAGCTCT TAAAGCCTCT ACAAGCTAAA CTTTCTTACG AAAAAAGCTT CCGCCTACCT
ACTGATACCG AACTTTTTGG CGATGGCGAT TTAGAGATTG GCAACTATAA GCTCAAACCC
GAAAATAGCG ATAACCTGAA TGTAAATCTC TCTTATCAAC CTGCGTTCAA AGTGCATTCA
TTCTTAGTAG AAGTGGGTTT TGCCTATCGT TATATCAAAG ATTATATCAT CAGAAGTATT
ATCAGTGCAG GAGCTAATGA AGGCTCTGCA GGAAGCCGAA ATCACGGTAA GGTACTCAAT
ATGGGAGTCG ATGCTACCCT GCGCTATTTC TTCTATAAAG ATGCATTTTC AGTAGGTGGC
AACTTGTCTT ATATGAACTT GCGCAACAAA GAAGAATTTA CTGAAACAGG TCGCCCTTCT
GCTATCTATA ACGACCGTTT GCCCAATATG CCTTATCTAT TTGGCAACGC CGATGCTACT
TGTAATATAG AAAGCCTCAT TGCTAAACGC GACAGACTAT CACTAAACTA TAATCTCTTT
TTCACCGAAG AGTTTTTTAC CTCGTGGCAA AGCGAAGGAA CAAAAATTAA AGTCCCTCGC
CAACTTTCTC ACGACGTGAG TCTTACCTAC TACACCCCTA ACAAACGGTT AAGTCTTTCC
GTAGAAGCCA AAAATATCAC CGATGAATTG TTGTACGATA ACTACAGCCT CCAAAAAGCT
GGTCGCGCTT TCTATGCCAA ACTCTCCTAC CGATTCTACT AA
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| Protein sequence | MPLSPKNIIL LLTSFCATQL FSQPVDEEVT QLSEVVLTGQ SPIKQVQKAA YNVVAIEAQQ
LRNLNSNAAD MLARVSGVKM RETGGVGAET AINLNGFTGR HVRIFIDGVP MNEANASFRI
NNIPAELIER IEIYKGVVPV TFGADALGGA INVVTRKSRY NYGNLSYTFG SFNTHKSTLN
LGQFLTDNIS VELNAYQNYS DNSYKVFTEY LDLQTGSYSK EKRWFKRFHD RYHNEAIIGR
VNIFDEKWAD KLSFALNYSQ EDKQLQNANL MQKVFGGKYR KSHNYSSSVE YEKKNILNGL
SFFLTGRYDF TTTQNVDEEA RRYSWTGEYE PMVTRGESQL QNTIFEGKTG YITSHLDYQL
NEKHSFQLTH TFSNYTRRNK NMLITNYTLD SDFMRRVNEK NISGLSYKFT PSERWNILAF
GKYYNTAVTG PVIVSGYGSR AVYEEETHHT QAWGYGGATT YQLLKPLQAK LSYEKSFRLP
TDTELFGDGD LEIGNYKLKP ENSDNLNVNL SYQPAFKVHS FLVEVGFAYR YIKDYIIRSI
ISAGANEGSA GSRNHGKVLN MGVDATLRYF FYKDAFSVGG NLSYMNLRNK EEFTETGRPS
AIYNDRLPNM PYLFGNADAT CNIESLIAKR DRLSLNYNLF FTEEFFTSWQ SEGTKIKVPR
QLSHDVSLTY YTPNKRLSLS VEAKNITDEL LYDNYSLQKA GRAFYAKLSY RFY
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