Gene Coch_0617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0617 
Symbol 
ID8367034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand- 
Start bp769459 
End bp769902 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content49% 
IMG OID644983044 
Product6-pyruvoyl tetrahydropterin synthase and hypothetical protein 
Protein accessionYP_003140736 
Protein GI256819457 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0720] 6-pyruvoyl-tetrahydropterin synthase 
TIGRFAM ID[TIGR00039] 6-pyruvoyl tetrahydropterin synthase/QueD family protein
[TIGR03367] queuosine biosynthesis protein QueD 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCGCA TTACTAAAAA ATTCGATTTT GAAGCAGGAC ACGCGCTCTA CGGCTACGAT 
GGCAAATGCA AAAACCTACA CGGACACAGC TATAAGCTCT ACGTAACTGT CATAGGCGAA 
CCTATTACCG ACCCCCATAA CGTGAAAAAC GGTATGGTAA TAGACTTCGG CGACCTCAAA 
CGCATCGTGC AGGAGCAAAT CATCGAAGCG TTCGACCACG CTATGGTCTT CAACGAACAT 
TCACCTCACA AGGCATTAGC CGAAGAATTG CGCACCAAAG GTCATCGCAT CATCACCGTG 
CCCTATCAGC CCACCAGCGA GAACCTCGTA ACCGACTTTG CTCGACGCAT CGCCTACCAA 
CTACCCGCCG GAGTCGAGCT CTTTTCAGTA CGCCTATGCG AAACTGAAAG CTCCTATGCC 
GAATGGTTCG CCTCAGATAA TTAA
 
Protein sequence
MIRITKKFDF EAGHALYGYD GKCKNLHGHS YKLYVTVIGE PITDPHNVKN GMVIDFGDLK 
RIVQEQIIEA FDHAMVFNEH SPHKALAEEL RTKGHRIITV PYQPTSENLV TDFARRIAYQ 
LPAGVELFSV RLCETESSYA EWFASDN