| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0590 |
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| Symbol | |
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| ID | 8367007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 740331 |
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| End bp | 742805 |
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| Gene Length | 2475 bp |
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| Protein Length | 824 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644983017 |
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| Product | glycoside hydrolase family 2 sugar binding |
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| Protein accession | YP_003140709 |
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| Protein GI | 256819430 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.429142 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAAA TCAACCTTCT CTTAACACTT GCCCTTACTA CTTCGAGCTG GTCGCAACAA
CAGCAAACTC TTGAAAAAGG GTGGAAATTT ACTCGTGAGG ACAAACCGGT GTTCTCGCAA
ACCAATTATA ACGATGCGAA ATGGCAACGC GTAACCGTGC CTCACGATTG GGCTATCTAT
GGTCCTTTTG ATATGGAAAA CGATATCCAG CGCACGGCTA TCAAGCAGGA CGGACAAAAA
GCAGCTATTG AACACACAGG GCGTACGGGA GGGTTACCTT TTGTAGGCGT AGGTTGGTAC
CGCACGCAGT TCAACGTGCC TGAACTTACG TCCGATAAGC AAGTGTTTGT ACAGTTTGAC
GGGGCGATGA GTAACCCCGA AGTATTTGTA AACGGACAAA AAGCTGGTGA ATGGCACAAC
GGCTATAACA CTTTCTTTTT GGATATCACT CCTTACGTAA AAGCCAATAA CAACACTTTG
GCAGTGCGCC TCAACAACCT TACCCAGATG TCGCGTTGGT ATCCAGGGGC AGGCTTGTAC
CGCAATGTGC ATATTATTAC TAAAAACAAG ACGCATATCC CTATTTGGGG TGTACAGATT
ACCACCCCCG AAATAACAAA CAACTTCGCC AAAGTAGTAG TAAATACTGA GTTTGTAGCT
GATAAGAAGA CTTCAGTTAC CGCAGAAACT GTTATTTTCA ATAATCAAGG TGAAAAAGTA
GCGTATACCA ATACCAAAGC GACTCCTTAC ACTACCGATA AAATTTCAGC AGAGCTGTAT
ATTGATAATC CTCGTTTGTG GGACATCGGC AAGCCGTACC TCTATAAAGC CGTTACCAAG
CTCTATGAAG GTGATACTGT AAAAGATGAG GTAACCACTA CCTTCGGGAT TCGCTCTATC
GAACTCAAGC CTAACGATGG TCTGTACCTC AACGGGCGCA AAATCAAAAT ACAAGGGGTG
TGTATGCACC ACGATTTAGG TCCGCTGGGC GGGGCAGTAA ATGAGAGTGC TATACGTCGA
CAAATACGCA TTATGCAGGA TATGGGTGTG AATGCTATCC GCACTTCGCA CAATATGCCC
GCGCCTGAAT ATGTGCGCGC TGCCGATGAA ATGGGTATGC TACTCGCCGT AGAGAGTTTC
GACGAATGGG CTATCCCAAA AGTAGAAAAC GGTTATCACT TGTACTTCAA AGAATGGGTA
GAAAAAGACC TTACGAACCT TGTAAAACAC TACCGCAACA ACCCTAGCGT GCTGATGTGG
TTCATCGGGA ATGAGGTGGA AGAACAGAGT GTAGAAAGTG GCTCGCAAGT AGCGCGCTAT
TTGCAAGATA TCATCAAAAA ATACGATACT ACCCGCCCCG TGAGCAATGG TATGGATAGA
CCCCACGATG TGCTCAAAAA CAATATGGCA GCAACGATGC AGTTAATGGG TTTTAATTAC
CGTCCGTTTA AGTACAAAGA GGCTTACCGC AAGTTGCCAC AACAGCTTAT TTTGGGTAGT
GAAACCGCCT CAACAGTGAG TTCGCGTGGG GTGTATAAGT TCCCCGTAGA GCGCAAATCA
ATGGCTAAAT ACCCCGATAT GCAATCGTCG TCTTATGACG TAGAACACTG CGGTTGGTCG
AACTTGCCCG AAGACGACTG GATACATCAA GAGGATTTGC CTTATACCGT AGGAGAGTTT
ATCTGGACAG GTTTCGACTA TCTGGGCGAA CCTACTCCTT ACTATGTGGA ATGGCCATCA
CACAGTTCCT ATTTTGGGGC AGTAGATTTG GCAGGACTAC CCAAAGACCG TTTCTATCTC
TACCGCTCAC ATTGGAATAA GGAAGCCGAA ACCTTACATA TCCTCCCTCA TTGGAATTGG
GAAGGGCGCG AGGGGCAAAC AACTCCTATC TTCGTTTATA CTAATTATCC TTCTGCCGAA
TTGTTTATCA ATGGCAAAAG TCAAGGAAAA CGCAGTAAAG ACCTCTCTAT AAAATTAGAA
GAGGAAGAAA AAGACGGCAA TCCGTCAGAC CTCAACCGCC AAAAGCGTTA CCGCCTAATG
TGGATGGATA CTAAGTACGA ACCTGGCACA GTGAAAGTAG TAGCTTACGA TGCCAATGGT
AAGGCAGTAG CCGAAAAAGA AATCCGTACT GCTGGCAAGC CTTATGCATT GCGCCTCAGC
AATGAACACA AAACAGTGCT TACCCCTAAT AGCAAAGACC TCGCTTTCAT CACCGTAGAA
GCGGTAGATA AGGACGGCAA TCTATGTCCA ACAGTCAATG ACCTTGTGCA GTTCAGTGTG
AAAGGAGCTG GCTTTTATAA AGCGGCTGCC AATGGCGATG CTACTTGCAC CGACCCATTT
CACTTGCCTA AAATGCACCT CTTCAACGGA AAATTAGTGA TGATGGTACA AGCAGGTGAA
AAAGCAGGCG AAATTACTAT TGAGGCAAAA AGTAAAACGC TAAAAGGAAA GATTTCAGTA
GAAGTTAGAA AATAG
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| Protein sequence | MNKINLLLTL ALTTSSWSQQ QQTLEKGWKF TREDKPVFSQ TNYNDAKWQR VTVPHDWAIY
GPFDMENDIQ RTAIKQDGQK AAIEHTGRTG GLPFVGVGWY RTQFNVPELT SDKQVFVQFD
GAMSNPEVFV NGQKAGEWHN GYNTFFLDIT PYVKANNNTL AVRLNNLTQM SRWYPGAGLY
RNVHIITKNK THIPIWGVQI TTPEITNNFA KVVVNTEFVA DKKTSVTAET VIFNNQGEKV
AYTNTKATPY TTDKISAELY IDNPRLWDIG KPYLYKAVTK LYEGDTVKDE VTTTFGIRSI
ELKPNDGLYL NGRKIKIQGV CMHHDLGPLG GAVNESAIRR QIRIMQDMGV NAIRTSHNMP
APEYVRAADE MGMLLAVESF DEWAIPKVEN GYHLYFKEWV EKDLTNLVKH YRNNPSVLMW
FIGNEVEEQS VESGSQVARY LQDIIKKYDT TRPVSNGMDR PHDVLKNNMA ATMQLMGFNY
RPFKYKEAYR KLPQQLILGS ETASTVSSRG VYKFPVERKS MAKYPDMQSS SYDVEHCGWS
NLPEDDWIHQ EDLPYTVGEF IWTGFDYLGE PTPYYVEWPS HSSYFGAVDL AGLPKDRFYL
YRSHWNKEAE TLHILPHWNW EGREGQTTPI FVYTNYPSAE LFINGKSQGK RSKDLSIKLE
EEEKDGNPSD LNRQKRYRLM WMDTKYEPGT VKVVAYDANG KAVAEKEIRT AGKPYALRLS
NEHKTVLTPN SKDLAFITVE AVDKDGNLCP TVNDLVQFSV KGAGFYKAAA NGDATCTDPF
HLPKMHLFNG KLVMMVQAGE KAGEITIEAK SKTLKGKISV EVRK
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