Gene Coch_0575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0575 
Symbol 
ID8366992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp723681 
End bp725285 
Gene Length1605 bp 
Protein Length534 aa 
Translation table11 
GC content43% 
IMG OID644983002 
ProductL-lactate transport 
Protein accessionYP_003140694 
Protein GI256819415 
COG category[C] Energy production and conversion 
COG ID[COG1620] L-lactate permease 
TIGRFAM ID[TIGR00795] L-lactate transport 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTTAT TTCTTAGCGT ACTTCCGATA GTACTACTCA TCTATTTGAT GGTTAAAAAG 
AACGCACTTC CCTCGTATAT AGCACTCCCG CTTATTGCAG GATTGGTGTA TGTGTTGCAC
CTAACTTATT TTGAAGGCTC TTTTGTAGCC GTAAATGCTA ACTTTATTAA GGCTATCATA
TCGGTAGCTA CGCCTATTAC GGTAATATTT GGGGCGGTGC TCTTCAACCG AATGATGGAG
ATGACAGGGG CAATGAATGT GTTGCGCTGT TGGTTAGGCA ACATCAGTCC GAATCCTGTG
GCACAGCTGA TGATTATAGG CTGGGCTTTT GCCTTTATGA TTGAAGGAGC CAGTGGTTTT
GGTACGCCTG CGGCTATTGC AGCACCTTTA TTGGTAGGAT TAGGCTTCAA GCCGTTGCAA
GTTGCTATTC TCACACTTAT TATGAACTCG GTACCCGTAT CGTTTGGAGC GGTAGGCACC
CCTACGTGGT TTGGTTTTGG TACGCTTATC GGTAATGGAG CTATTTCTGA CACTGAGCTT
TCCGACATAG GTAGGATTAC GGCTATTGTG CATCTGTTTG CTGCTTTTGT AATTCCTGTG
ATGGCACTCA AAGTGATTGT ATCTTGGCAA CAGATACGCC GAAACATAGT TTTTATACTT
ATTAGTATTC TCTCGTGCAC GGTGCCTTAT GTGGTTATTG CGTGGTTCAA TTACGAGTTC
CCCGCTTTGG TAGGAGGGGC TATTGGGCTC TTTATCTCGG TGGGCATTGC AAGCAAAGGA
ATAGGACTAT CTAAAACTGA TAACCGTGAA GTACATCACG AGAAGGTAAA ATCTTCAGAA
CTCATCAAAG CCCTTTTTCC TACGGCTTCA CTCATTATCA TTTTAGCACT TACCCGCATT
AAACAACTTC CACTAAAAGC ACTTTTGAAC GATACAACTG AGAGGTTTAC TATAAAATTG
GGTTATCTGG GCGATTTTGA GGTTACTAAA GGACTCATTT TTTCACTGAA TAATATTTTT
GCTACGGGCG AAAATGAAAG CTACAAACTG CTCTACGTGC CTGCACTCAT TCCGTTTGTA
GTTACAGTAC TCATTTCCAT TCCGTTGTTC TCGCTGAAAT GGAAGCAAAC CAAAGAGCTT
TTTTCGGCTA GTTTTGTGCA GATACAGAAG CCTTTCTTGG CTTTGGTAGG TGCGCTTATT
ATGGTAAATG TAATGCTGAT GGGAGGTGAA AACTCTATAG TGCAAATTAT CGGTCGTGGA
TTGGCACAAG CCACAGGCAG TCATTGGACG ATCTTCTCAT CGTATTTAGG AGCGGTAGGG
TCTTTCTTTT CAGGCTCTAA CACCGTATCG AACCTTACTT TTGGAGCCGT GCAATACTCG
GTTGCTAATA CCACAGGACT TTCGGTGCCT CTGATACTCG CTTTGCAATC AGTAGGCGGA
GCGATGGGTA ATATGGTGTG TATCAACAAT ATTATTGCGG TATGTTCGGT ATTAGGCATT
GATAAAGCTG AAGGGAAAAT AATGAAAATT ACCGTTGTGC CTATGATGGT ATATGGAGTG
ATAGCTGCGC TGGTAGCATA TCTTGTTATC CCGCTAATAT TCTGA
 
Protein sequence
MALFLSVLPI VLLIYLMVKK NALPSYIALP LIAGLVYVLH LTYFEGSFVA VNANFIKAII 
SVATPITVIF GAVLFNRMME MTGAMNVLRC WLGNISPNPV AQLMIIGWAF AFMIEGASGF
GTPAAIAAPL LVGLGFKPLQ VAILTLIMNS VPVSFGAVGT PTWFGFGTLI GNGAISDTEL
SDIGRITAIV HLFAAFVIPV MALKVIVSWQ QIRRNIVFIL ISILSCTVPY VVIAWFNYEF
PALVGGAIGL FISVGIASKG IGLSKTDNRE VHHEKVKSSE LIKALFPTAS LIIILALTRI
KQLPLKALLN DTTERFTIKL GYLGDFEVTK GLIFSLNNIF ATGENESYKL LYVPALIPFV
VTVLISIPLF SLKWKQTKEL FSASFVQIQK PFLALVGALI MVNVMLMGGE NSIVQIIGRG
LAQATGSHWT IFSSYLGAVG SFFSGSNTVS NLTFGAVQYS VANTTGLSVP LILALQSVGG
AMGNMVCINN IIAVCSVLGI DKAEGKIMKI TVVPMMVYGV IAALVAYLVI PLIF