Gene Coch_0569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0569 
Symbol 
ID8366981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp714229 
End bp714759 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content39% 
IMG OID644982991 
ProductD-tyrosyl-tRNA(Tyr) deacylase 
Protein accessionYP_003140688 
Protein GI256819409 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1490] D-Tyr-tRNAtyr deacylase 
TIGRFAM ID[TIGR00256] D-tyrosyl-tRNA(Tyr) deacylase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGAGAA AACAGCATAT TAACAAATCT GAGAGACAAA CTCAGAAGGA CTTGGAGAGT 
AATAAAAAAA GATATTTTAT GAGAGTAGTT ATTCAGCGTG TAACTCACGC ATCGGTGGAT
ATAGATAAGC AAACAGTAGC TTCTATCAAT AAAGGTTTAT TAGTATTGGT AGGTATAGAA
GATAGCGACA CCAATGAGGA TATAGCGTGG TTATCGGCTA AAATAGTGAA TTTACGCGTT
TTTGACGATG AAAATGGGGT GATGAATCTT TCGGTAAAAG ATGCAGGAGG AGAAGTGCTT
ATCGTGTCGC AATTCACCTT GCACGCCTCT ACTAAAAAAA ACAACCGCCC CAGCTATATA
AAAGCAGCAC GTCCTGAAGT TGCAATTCCT ATCTATGAGG CGTTTATAAA GCAAGTGGAA
AGTTTGTTAG GAAAGCGAGT GCCCACAGGA CAGTTTGGGG CGATGATGCA AGTAGCCTTG
TGTAATGACG GTCCTGTAAC TATTCTTATA GATACAAAAA ATAAGGAATA A
 
Protein sequence
MRRKQHINKS ERQTQKDLES NKKRYFMRVV IQRVTHASVD IDKQTVASIN KGLLVLVGIE 
DSDTNEDIAW LSAKIVNLRV FDDENGVMNL SVKDAGGEVL IVSQFTLHAS TKKNNRPSYI
KAARPEVAIP IYEAFIKQVE SLLGKRVPTG QFGAMMQVAL CNDGPVTILI DTKNKE