| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0568 |
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| Symbol | |
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| ID | 8366980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 709756 |
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| End bp | 714036 |
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| Gene Length | 4281 bp |
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| Protein Length | 1426 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 644982990 |
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| Product | CRISPR-associated protein, Csn1 family |
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| Protein accession | YP_003140687 |
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| Protein GI | 256819408 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3513] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01865] CRISPR-associated protein, Csn1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.596809 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAATA TACTTGGATT AGATTTGGGC ACCACTTCAA TAGGTTTTGC CCATATTGTA
GAAGATGAAA ACAAAGAAAA ATCAGAGATT AAGGAATTAG GAGTGCGTAT TGTGTCTTTA
ACCACAGATG AACAATCCGA CTTTGAAAAA GGAAAATCAA TAACTACTAA TGCCAATAGA
ACCCTTAAGC ACGGAGCAAG ACTAAATCTT GATCGCTATC AACAAAGGCG AAAATATCTC
ATAGATTTAT TGCAGAAAGC AAACCTAATT ACTCCCTCCT CTATCTTAGC TGAAAATGGC
AAAAATACCA CACATTCTAC TTGGCAATTG AGAGCTAAAG CTGTTACCGA ACGTATCGAG
AAAGAAGAGT TTGCTAGGAT ACTACTGGCT ATTAATAAAA AACGAGGTTA TAAAAGCAGT
AGAAAAGCAA AAACTGAAGA CGAAGGACAA GCAATAGATG GAATGGCTAT AGCAAAGCGC
CTCTATGATG AAAACTTAAC TCCAGGACAG TTATCGCTAC AATTACTTCA ACAAAACAAA
AAACTCCTCC CAGACTTTTA TCGTTCAGAT TTACAAAAAG AATTTGACCT CGTTTGGAAT
TTTCAAAAAC AGTTTTACCC TGATATCCTA ACAGATATTT TTTATAAAGA ATTGCAAGGG
AAAGGTAAGG ATGCTACTTC AAAAGCTTTT TCTAAAAGAT ATCATTTTGA CACAACTGAA
AACAAAGGTT CTAAAGAATC TGTTCGTTTG CAAGCCTATC AGTGGCGTGC GGAGGCTATA
TCTAAACAAC TTTCAAAAGA AGAAGTAGCT TATGTCTTAA CCGAAATCAA CAACAATTTG
AACAATGCAA GTGGCTATTT AGGCGCTATT TCCGATAGAA GTAAAGAACT CTATTTCAAT
CGTCAAACAG TAGGGCAATA CTTGTATGCA AAGCTTCAGG AAAATAGGCA TAATAGCCTT
AAAAATAAAG TGTTTTACCG TCAGGATTAC TTAGATGAGT TTGAACGCAT TTGGGAAACT
CAAGCTTCAT TTCACAAAGA ATTGACTGAT GAACTTAAAA AGCAAATCCG TGATGTGGTA
ATTTTCTATC AACGTAAACC TAAATCTCAA AAAGGATTGA TATCATTTTG TGAGTTTGAG
AGCAAAGAAA TTGAGATAGA AAAAGACGGA AAAACTATAA CTAAAAACAT TGGAGCTCGT
GTTGTCCCTA AATCCTCTCC TTTGTTTCAA GAATTTAAGA TTTGGCAAAT ACTCAATAAT
GTTATCTGCA AAAGAAAAGG TATTAGGAAA AAGAAAATCT CTGCTAAGAC TACTCAGTTA
GATTTGCTCA ATGAATCTTC TCAAACGATT TTTAGTTTGG ATATGGAATG CAAACAACTC
CTTTTTGACG AACTGAATCT AAAAGGAGAC CTAAAATCGG ATAAAGTACT GAAATTATTA
GGCTATTCTC CTCAAGAATG GGAAATCAAC TACAATCAAT TAGAAGGAAA TCGCACTCAA
AAAGCACTCT ATGAAGCCTA TTTGAAGATT GTCGAAATGG AAGCTCACGA TGTGAAAGAT
ATTTTACAGA TAAAATCTGC AAAAGACGAT TGGTCTTTAG ACGAATCTCC TCTTTCAGCT
TCCGAAATCA GAGAAAAGGT AAAAGCTATC TTTCAAACAT TAGGAATATG TACTAAAATC
CTTTATTTTG ACCCTCTTTT GCCTGTAAAA GAGTTTGAAG AGCAGGATTC CTATCAGCTA
TGGCATTTGC TTTATTCCTA TGAAAGTGAT GATTCTACCT CTGGTAACGA AACTCTTTAC
CGAATCTTAG AAAAGAAATA CGCTTTTAAG AGAGAACACG CTAGAATACT CGCCAATGTA
GCCTTGCAAG ATGATTACGG TAGCCTATCT ACTAAAGCTA TCCGCAAGAT ATACCCTAAT
ATAAAAGAAA ATCAGTATAG CACAGCTTGT GAAAAGGCAG GTTATAAGCA CTCTAAACTA
TCTCTAACCA CAGAAGAATT AGAGGCTCGT GAACTGAAAA ATATCATTCC ACTACTTAAA
AAGAACGCTT TGAGAAATCC TGTAGTTGAG AAAATTCTTA ATCAGATGAT CAATGTAGTG
AACGCTTTGA TTGAGAAAAA CAGTGAACGA GATGCTGAAG GGAAAATTAC AAAATATTTT
CATTTCGATG AAATTCGCAT TGAATTAGCT CGTGAGTTAA AGAAAAATGC GCAAAAGAGG
TATGAAATGA CCCAAAATAT CAACAAAGCT AAATTAGAAC ATCAAAAGAT TAGCGAAATA
CTTCAGAAAG AATTTGGCAT CAAGAATCCT ACGAAATCTG ATATTATTCG TTATCGCTTG
TATCAAGAAT TGGAACACAA TGGCTATAAA GAACTATATA CTAATGCCCC TATAGCTCGA
GATATGTTGT TTAGTAAAAA TATTGAGATA GAACACATTG TTCCTAAGGC ACGAGTGTTC
GACGATAGTT TTTCTAATAA AACATTGACT TTCCATAGAA TAAATAGTGA CAAAGGAGAA
TATACTGCTT TTGATTATAT TACTTCTTTA AATAGTGAAG AAGAACTCAA TCAATATCTC
ACCAGAGTAG AAAATGCCTA TAAAACAAAA AGCATTTCTC CTACTAAATA CAAGAATTTA
CTCAAAAAAG CCTCTGAAAT AGGTGATGAC TTTATCAATA GAGACCTGAG AGATACTCAG
TACATAGCTA AAAAAGCTAA AGAAATACTC TTCCAAGTAA CTAAAAATGT GCTGTCTACC
TCAGGAAGTA TCACCGATAG ATTGCGCGAA GACTGGGGCT TGGTAGATGT GATGAAAGAG
TTAAATATGC CTAAATATCA GTCGTTAGGA CTTACTGAAG TAGAAGAACG CAAAGATGGT
AACAAAGTAA CTGTGATTAA GAACTGGACA AAGCGTAACG ACCACCGTCA CCACGCAATG
GATGCCCTTA CGGTAGCTTT CACCAAACCT TCTTACATAC AGTACCTCAA TCATCTCAAC
GCTCGAAAAG ACGAAAACAA CAAAAATTAT TCGGTTATTT TAGCTATCGA GGAAAAAGAA
ACAATTAAAG TTCCAACTAA TAATGGTAAG AATAAGAGAG TTTTTATAGA GCCTATACCT
AACTTTAGAC AAGTAGCAAA AAAACACCTC GAAGAAATAT TCATTTCGCA CAAAGCAAAG
AATAAAGTAG TTACCAAAAA CACAAATAAA CCTGCTGGCA CTGATAAACA ACAAATTACA
CTCACGCCAC GAGGTCAGCT GCACAAAGAA ACTATATATG GCAAATACCA ATATTATATC
AATAAAGAAG AAAAAATAGG TGTAAAGTTT GATGAAAGAA CTATCGCAAA AGTCTCTAAT
CCTGTTTATC GCGAAGCATT GCTAAAAAGA TTGCAAGCTA ATGACAACGA CCCTAAAAAA
GCCTTTGCAG GGAAGAACGC ACTATCTAAA AACCCTATTT ATTTAGATGA ATCAAAAACT
AAAACTTTGC CAGAAAAAGT AAATCTCACC TACTTGGAAG AAGATTTTTC TATTCGGAAA
GATATTTCTC CAGACAATTT CAAAGATTTG AAATCTATTG AAAAAGTAAT TGATCAAGGA
GTAAAACGTA TTCTTATCAA GCGACTCCAA GCCTACGATA ATGATCCTAA GAAAGCCTTT
GTAGACTTAG AAAAGAACCC TATTTGGCTC AATAAAGAAA AAGGAATTGC GATTAAACGC
GTTACTATAA GTGGCGTGAA CAACGCTCAA CCTTTGCACA TAGGAAAAGA CCATTTAGGA
AAAACTACTT TAAATAAAGA AGGAAAAGAA ATTCCTGTAG ATTATGTAAG TACTGGCAAT
AACCACCACG TGGCTATTTA TCGGGATAAA GAAGGTAATT TGCAGGAACA AATAGTTTCA
TTCTTTGACG CTGTCGTACG AGCTCAGCAA GGGATTCCTA TTATTGATAA AACCTACAAA
CAAGCAGAAG GTTGGCAATT TCTGTTCACT ATGAAACAGA ATGAAATGTT CGTATTTCCC
AATGCAACAA CAGGTTTTAA TCCTGCTGAA ATAGACTTGT TAGATCCTAA AAATAAAAAA
TTGATAAGCC CCAATTTGTT TAGAGTACAA AAAATAGCTA CTAAAGATTA TTTTTTTAGA
CATCACTTAG AAACTAATGT AGAGACAGAT AATATTTTAA AAAATGTAAC TTGGAAGAGA
GAAGGCTTGT CAGGGTTAAA AGATATCGTA AAAGTCCGTA TTAATCACTT AGGCGATATT
GTAAGCATAG GCGAATATTA A
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| Protein sequence | MKNILGLDLG TTSIGFAHIV EDENKEKSEI KELGVRIVSL TTDEQSDFEK GKSITTNANR
TLKHGARLNL DRYQQRRKYL IDLLQKANLI TPSSILAENG KNTTHSTWQL RAKAVTERIE
KEEFARILLA INKKRGYKSS RKAKTEDEGQ AIDGMAIAKR LYDENLTPGQ LSLQLLQQNK
KLLPDFYRSD LQKEFDLVWN FQKQFYPDIL TDIFYKELQG KGKDATSKAF SKRYHFDTTE
NKGSKESVRL QAYQWRAEAI SKQLSKEEVA YVLTEINNNL NNASGYLGAI SDRSKELYFN
RQTVGQYLYA KLQENRHNSL KNKVFYRQDY LDEFERIWET QASFHKELTD ELKKQIRDVV
IFYQRKPKSQ KGLISFCEFE SKEIEIEKDG KTITKNIGAR VVPKSSPLFQ EFKIWQILNN
VICKRKGIRK KKISAKTTQL DLLNESSQTI FSLDMECKQL LFDELNLKGD LKSDKVLKLL
GYSPQEWEIN YNQLEGNRTQ KALYEAYLKI VEMEAHDVKD ILQIKSAKDD WSLDESPLSA
SEIREKVKAI FQTLGICTKI LYFDPLLPVK EFEEQDSYQL WHLLYSYESD DSTSGNETLY
RILEKKYAFK REHARILANV ALQDDYGSLS TKAIRKIYPN IKENQYSTAC EKAGYKHSKL
SLTTEELEAR ELKNIIPLLK KNALRNPVVE KILNQMINVV NALIEKNSER DAEGKITKYF
HFDEIRIELA RELKKNAQKR YEMTQNINKA KLEHQKISEI LQKEFGIKNP TKSDIIRYRL
YQELEHNGYK ELYTNAPIAR DMLFSKNIEI EHIVPKARVF DDSFSNKTLT FHRINSDKGE
YTAFDYITSL NSEEELNQYL TRVENAYKTK SISPTKYKNL LKKASEIGDD FINRDLRDTQ
YIAKKAKEIL FQVTKNVLST SGSITDRLRE DWGLVDVMKE LNMPKYQSLG LTEVEERKDG
NKVTVIKNWT KRNDHRHHAM DALTVAFTKP SYIQYLNHLN ARKDENNKNY SVILAIEEKE
TIKVPTNNGK NKRVFIEPIP NFRQVAKKHL EEIFISHKAK NKVVTKNTNK PAGTDKQQIT
LTPRGQLHKE TIYGKYQYYI NKEEKIGVKF DERTIAKVSN PVYREALLKR LQANDNDPKK
AFAGKNALSK NPIYLDESKT KTLPEKVNLT YLEEDFSIRK DISPDNFKDL KSIEKVIDQG
VKRILIKRLQ AYDNDPKKAF VDLEKNPIWL NKEKGIAIKR VTISGVNNAQ PLHIGKDHLG
KTTLNKEGKE IPVDYVSTGN NHHVAIYRDK EGNLQEQIVS FFDAVVRAQQ GIPIIDKTYK
QAEGWQFLFT MKQNEMFVFP NATTGFNPAE IDLLDPKNKK LISPNLFRVQ KIATKDYFFR
HHLETNVETD NILKNVTWKR EGLSGLKDIV KVRINHLGDI VSIGEY
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