Gene Coch_0562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0562 
Symbol 
ID8366974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp703705 
End bp704226 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content48% 
IMG OID644982984 
Producthypothetical protein 
Protein accessionYP_003140681 
Protein GI256819402 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.261919 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAATTC AAGGACGAAT TATAAAGATT AGCCCTACAC AAACCGTAGG ACAAAACGGC 
TTTCAACGCC GTGATGTGGT GATTTCTACT GAGGAACAAT ACCCCCAGTA TATCCCTTTT
GACTTTGTAC AAGAAAAATG TGTACTTCTC GACAACTTTC AGGTAGGGCA ATTGGTACGC
ATCAGTTTCA ATATTCGCGG TCGTGAATGG GTAAACCCAC AAGGAGAAAC TAAATATATT
GTGAACTTAC AAGGATGGCG TATTGAAAAT GCTGAGGTGG CACAAGGAGC CTATCCCCCT
CCGCAAGGGC AATATCCACC ACAGGGGCAA CCTGCTTATC CGCCACAAGG ATATGCACAA
CCACAATATC AGCAAGCGCC TCCGCAATAT CAGCAAGCCC CACCACAATA CCAACAAACG
CCCGCTCAGT ATCCGCCACA AGCCCCTCAG CAGGCTTTTA GTGCACCAGA CCCCGCACAG
GGAGCTTCTG CCCCTACTGA GGAAGACGAT TTGCCATTCT AA
 
Protein sequence
MEIQGRIIKI SPTQTVGQNG FQRRDVVIST EEQYPQYIPF DFVQEKCVLL DNFQVGQLVR 
ISFNIRGREW VNPQGETKYI VNLQGWRIEN AEVAQGAYPP PQGQYPPQGQ PAYPPQGYAQ
PQYQQAPPQY QQAPPQYQQT PAQYPPQAPQ QAFSAPDPAQ GASAPTEEDD LPF