Gene Coch_0561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0561 
Symbol 
ID8366973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp703033 
End bp703701 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content45% 
IMG OID644982983 
Productleucyl/phenylalanyl-tRNA/protein transferase 
Protein accessionYP_003140680 
Protein GI256819401 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2360] Leu/Phe-tRNA-protein transferase 
TIGRFAM ID[TIGR00667] leucyl/phenylalanyl-tRNA--protein transferase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.498569 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATATACT TAACGAACGA TAAAACATCT TTTCCTTCCC CCGATACGGC TTCGGAGGAA 
GGAATTGTTG CTTTAGGAGG GAACCTTACC CCTGAACGGC TTATTGAGGC GTATTCGGAG
GGTATTTTCC CGTGGTATAA CGAAGGAGAG CCGGTAGTTT GGTGGTGTCC TGACCCGCGT
TTTGTACTCT TTCGGGAGAA ATTGCATATC AGCAAGCATA TGCGTAAGAT GTTACGCGAA
GCACCTTATC GCGTTACTTA TAACCATTGT TTTACTGAGG TGATGCGACA GTGCGCTACT
GTTCCGCGTA AAGACCAAGA CGGCACGTGG ATTCACCCTG AACTGATAGA AGCCTATACA
GGCTTGCATA AAAGAGGGAT AGCGCACTCG GTAGAGGTGT GGGAAGGAGA TGTGCTCATA
GGAGGTTTAT ACGGGCTAAA AATGGGCAAA ATCTTTTGTG GGGAGAGTAT GTTTAGCAAG
CGTAATAATG CGTCAGAATA CGGCTTTATC ACCTACCTGC AAGCACACCC CGATATAGCA
TTGGTAGATT GCCAAATATA CAGCGAGTAC TTAGAGCGTT TGGGAGCAGA GGAAATACCT
CGCAAAGAGT TTTTGGCGCT TTTAGGTAAG GCATATGAAG AAAGAGAAAA TGAAAAAATA
ATAACTTAA
 
Protein sequence
MIYLTNDKTS FPSPDTASEE GIVALGGNLT PERLIEAYSE GIFPWYNEGE PVVWWCPDPR 
FVLFREKLHI SKHMRKMLRE APYRVTYNHC FTEVMRQCAT VPRKDQDGTW IHPELIEAYT
GLHKRGIAHS VEVWEGDVLI GGLYGLKMGK IFCGESMFSK RNNASEYGFI TYLQAHPDIA
LVDCQIYSEY LERLGAEEIP RKEFLALLGK AYEERENEKI IT