Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0561 |
Symbol | |
ID | 8366973 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 703033 |
End bp | 703701 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644982983 |
Product | leucyl/phenylalanyl-tRNA/protein transferase |
Protein accession | YP_003140680 |
Protein GI | 256819401 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2360] Leu/Phe-tRNA-protein transferase |
TIGRFAM ID | [TIGR00667] leucyl/phenylalanyl-tRNA--protein transferase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.498569 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATATACT TAACGAACGA TAAAACATCT TTTCCTTCCC CCGATACGGC TTCGGAGGAA GGAATTGTTG CTTTAGGAGG GAACCTTACC CCTGAACGGC TTATTGAGGC GTATTCGGAG GGTATTTTCC CGTGGTATAA CGAAGGAGAG CCGGTAGTTT GGTGGTGTCC TGACCCGCGT TTTGTACTCT TTCGGGAGAA ATTGCATATC AGCAAGCATA TGCGTAAGAT GTTACGCGAA GCACCTTATC GCGTTACTTA TAACCATTGT TTTACTGAGG TGATGCGACA GTGCGCTACT GTTCCGCGTA AAGACCAAGA CGGCACGTGG ATTCACCCTG AACTGATAGA AGCCTATACA GGCTTGCATA AAAGAGGGAT AGCGCACTCG GTAGAGGTGT GGGAAGGAGA TGTGCTCATA GGAGGTTTAT ACGGGCTAAA AATGGGCAAA ATCTTTTGTG GGGAGAGTAT GTTTAGCAAG CGTAATAATG CGTCAGAATA CGGCTTTATC ACCTACCTGC AAGCACACCC CGATATAGCA TTGGTAGATT GCCAAATATA CAGCGAGTAC TTAGAGCGTT TGGGAGCAGA GGAAATACCT CGCAAAGAGT TTTTGGCGCT TTTAGGTAAG GCATATGAAG AAAGAGAAAA TGAAAAAATA ATAACTTAA
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Protein sequence | MIYLTNDKTS FPSPDTASEE GIVALGGNLT PERLIEAYSE GIFPWYNEGE PVVWWCPDPR FVLFREKLHI SKHMRKMLRE APYRVTYNHC FTEVMRQCAT VPRKDQDGTW IHPELIEAYT GLHKRGIAHS VEVWEGDVLI GGLYGLKMGK IFCGESMFSK RNNASEYGFI TYLQAHPDIA LVDCQIYSEY LERLGAEEIP RKEFLALLGK AYEERENEKI IT
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