| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0558 |
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| Symbol | |
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| ID | 8366970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 700443 |
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| End bp | 701654 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644982980 |
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| Product | bicyclomycin/multidrug efflux system |
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| Protein accession | YP_003140677 |
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| Protein GI | 256819398 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTAGAAC CCGAAGAACT CAAAGACTCA AAACCCGACC TACTGTTTAT CCTCATTATG
GGACTCCTAT CGATGCTCAC CCCTCTGGCT ATCGATATGT ACCTCCCTGC CTTTGTGAAG
ATTGCTAATG ATTTGAATGT ATCCGAAGAG ATGATATCTC AAACCTTAGC ACTCTTTACC
CTTGGTTTTG CTTTTGGGCA ACTCTTCTGG GGACCTCTAT CCGATAGTTA TGGGCGCAAA
CCTATCATTC TTATCGGGAT TATCACCTCA GCATTGGTGT CGTTAGTGAT TACGCAAATT
CACCATATCC ATCACTTTTA TATACTGCGC TTTGTACAAG GCTTTTTTGG AGCCTCACCA
GCGGTAGTAA CGGGTGCCCT CTTGCGCGAC CTTTTCGCCA AGAACGAGTT TGCCCGCCAA
ATGTCGATGA TTATGATTGT TACGATGATT GCCCCACTTA TCGCCCCCGT ACTGGGCGGT
CACCTCACCG ACTGGTTTCA TTGGCATATC ATCTTCTACG TGCTGATGGT TTTAGGACTC
TTGGCAGCGC TCTTAGTGAG TTATAAAATC CCTGAAACGC TTCCTAAGTT CAAGCGTGTT
CCTTTGAAAA TAGGCAACAC CTTACGCATT TATGGCAAGC TCCTCAGCAA TAAAAAGGTA
TTGGGGTATA TTTTCTGCAA TTCGCTTTCC TATTCAGGAA TGTTTTGCTT TATCACCACG
GGGTCTATTG TGTACACCAA ACTCTTTGGG GTAGCTCCTC AGCATTTTGG ATACTTTTTC
CTTCTCAATG TAATTGTAAT GATGACGGCA ACCTCGCTCA ATGGCAAATT CGTCACCAAA
ATAGGCGTAG AAAAATCCTT GCGCTTGGGG CTTACTATCC AACTCATTGC AGGAGCGTGG
CTGGTGATAT GTGGTATTTT TCATTTGGGA TTATGGGCTA CCGTAGCAGG AGTTTCAATG
TTTGTAGGTT TGGTATCGGT AGTGTCCAGC AGTGCCAATG CCGCCATTTT GGATATGTAC
CCCGAAGTAG CCGGTACCGC CAATTCACTC ACAGGAATGT TGCGTTTTGG TATCGGTTCG
GTAGTAGGAG CAGTGCTCTC GCTTTTCGCC ATCACCTCCG AGCGCCCAAT GGTATTTGCA
ATGGCAATAT GTATAGGAGT AGGCGCCCTC AGCTACTTGC TGTTAGTCGC CCGTCGCACC
ATTAGCAAAT AA
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| Protein sequence | MLEPEELKDS KPDLLFILIM GLLSMLTPLA IDMYLPAFVK IANDLNVSEE MISQTLALFT
LGFAFGQLFW GPLSDSYGRK PIILIGIITS ALVSLVITQI HHIHHFYILR FVQGFFGASP
AVVTGALLRD LFAKNEFARQ MSMIMIVTMI APLIAPVLGG HLTDWFHWHI IFYVLMVLGL
LAALLVSYKI PETLPKFKRV PLKIGNTLRI YGKLLSNKKV LGYIFCNSLS YSGMFCFITT
GSIVYTKLFG VAPQHFGYFF LLNVIVMMTA TSLNGKFVTK IGVEKSLRLG LTIQLIAGAW
LVICGIFHLG LWATVAGVSM FVGLVSVVSS SANAAILDMY PEVAGTANSL TGMLRFGIGS
VVGAVLSLFA ITSERPMVFA MAICIGVGAL SYLLLVARRT ISK
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