Gene Coch_0554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0554 
Symbol 
ID8366966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand- 
Start bp694438 
End bp695049 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content42% 
IMG OID644982976 
ProductPASTA domain containing protein 
Protein accessionYP_003140673 
Protein GI256819394 
COG category[S] Function unknown 
COG ID[COG2815] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0972959 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAGA TTAAAGAATT CTTAAAAAAC TCAGGAAAGA AACTAGCTTG GCAATTTGCT 
TTTGCCATAG TGGCGTGTAT TATATTAGTT TGGTGTGTAT TGCAACTCTT GCGCATCTAT 
ACGGCGCACG GAGAGTACAT TACAGTACCT AATTTGAGCA AGAAAACACT TACCGAAGTA 
GGGGTGATAT TAGATAAGCA ACAATTGCGT TATGAGGTGT TGGATTCTAC TGAATACGAC 
CCTAAATACC CTCCTCTATC GGTAATCAGT CAGACGCCTG AGGCTACCGA GAGAGTAAAG 
AAGAACCGCA AAATATACCT TAACATCAAT CCGTCGGGCT ATCATAAAGT AACAGTGCCT 
AAGGTGATAC AAGTAACGCG CCGGAATGCA GTAGCTACCT TGCAATCGGT AGGGCTTGCA 
ATCGGTAGAG TTACTTATGT GAACAATATA GGGAAGGATA TGGTATTGGA GATGCAACAC 
GACGGTAAAC CTGTACAACC TGGCGATAAG CTTATTAAAA CCTCACGTAT AGACCTTGTG 
TGTGGCAACG GCTTAGAGGC TCGGGATACT ATCCCTACCG AAATACCTAT TGAAGAACTG 
ATAGGAGATT AG
 
Protein sequence
MEKIKEFLKN SGKKLAWQFA FAIVACIILV WCVLQLLRIY TAHGEYITVP NLSKKTLTEV 
GVILDKQQLR YEVLDSTEYD PKYPPLSVIS QTPEATERVK KNRKIYLNIN PSGYHKVTVP 
KVIQVTRRNA VATLQSVGLA IGRVTYVNNI GKDMVLEMQH DGKPVQPGDK LIKTSRIDLV 
CGNGLEARDT IPTEIPIEEL IGD