Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0549 |
Symbol | |
ID | 8366961 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 685966 |
End bp | 686865 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644982971 |
Product | lipid A biosynthesis acyltransferase |
Protein accession | YP_003140668 |
Protein GI | 256819389 |
COG category | [R] General function prediction only |
COG ID | [COG4261] Predicted acyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.3206 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCACGCTA ACGAACAAGC CAAAACGAAA TGGCAAGGCA AGTCTAAGGG TACCGTATTA GGCTATAGTA TCTTTGTGTG GCTGATGAAA CACTTGGGTA TTTATGCTGC TTATGCTTTG CTCATCTTTG TAGCGTTCTA CTACTTTTTG TTTGAGCGGC GCTCCAATGG CTATATGTAT TACTATTTCC GTCACCGCTT GGGCTATTCG CCTCTGAGAG CGGTAGTGAA CTTGTACTTA AATTATTTTA CTTTCGGGCA AACTATTATT GATAAGATTG CTATCTTGGC AGGCTTGGAA GAGAAATTTA CTTATGAGTT TGATGGAGTA GAAAGCTTAC ATAAACTATT AGACGAACAA CAGAGCGGAA TACTTATTTC CGCACACATA GGCAACTTTG AAATTGCTGA ACCTTTTTTC AGGAAAATAG ATATTGATTT GAAGATAAGC ACCGTAACTA CCGATATGGA ACACTCGGTA ATCAAGGAGT ATTTGGAGTC GATTTCTAAA AATAAACCCT CGAATCAGTT TATCTATGTG AAAGAAGATA TGTCGCATAT CTTCAAAATC AACGATGCTA TTGGCGACAA CAAAATAGTG TGTTTCACGG GAGACCGATA TTTTGAGGGC GTGCGTTCGC TCAAAGGAAC GCTGTTGGGC GCAGAAGCTA CCTTCCCCGC AGGTCCTTTC TTTATAGCCT CGCGCTTGAA AGTGCCGGTG CTTTTCGTTT ATGTGATGAA GGAAAGTAGA TTGCATTACC ACTTGTATGC CCAAGTAGCT GAAGTGAAAA GTCGCGATGC CCAAGCGCTA CTCGACGCTT ATACCGAGAA TATGGAGCAA ATGCTACGAA AGTATCCGCT ACAATGGTTT AATTATTTCA ACTTTTGGGA TGAACAATGA
|
Protein sequence | MHANEQAKTK WQGKSKGTVL GYSIFVWLMK HLGIYAAYAL LIFVAFYYFL FERRSNGYMY YYFRHRLGYS PLRAVVNLYL NYFTFGQTII DKIAILAGLE EKFTYEFDGV ESLHKLLDEQ QSGILISAHI GNFEIAEPFF RKIDIDLKIS TVTTDMEHSV IKEYLESISK NKPSNQFIYV KEDMSHIFKI NDAIGDNKIV CFTGDRYFEG VRSLKGTLLG AEATFPAGPF FIASRLKVPV LFVYVMKESR LHYHLYAQVA EVKSRDAQAL LDAYTENMEQ MLRKYPLQWF NYFNFWDEQ
|
| |