Gene Coch_0546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0546 
Symbol 
ID8366958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp683346 
End bp683780 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content43% 
IMG OID644982968 
Producthypothetical protein 
Protein accessionYP_003140665 
Protein GI256819386 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.460659 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTTTAC CAATTACAGA TAAAAACAAA ATTCTCACTC TTATACCCCA GCGCAATCCC 
ATTGTAATGG TAGATGCTCT TTGGGAATAT ACCCCCACCG AGGGAGTGGC AGGGCTCACC
ATTATCCCTA GCAACCTCTT TGTACAGCAA GAGATATTCT TAGAAAGCGG ACTCATAGAG
CACATTGCCC AAAGCATTGC CTTGCACAAA GGTTATTACT ACTATCTCAA CGGAAAACCT
GCTCCTATGG GGTATATAGG AGCGATTAAA AACATAGAGA TACAATCGCT ACCCAAAGTA
GGTGACACGC TCAAAACACA CATCACTATC CAGCAAGAGT TTATGGATGT AACCCTCGTA
ACAATGCAAA CCTTTATAGG TGATACCCTC ATTGCCCAAG GCGAAATGAA AACCGTACTT
GCCCCTAACC CCTGA
 
Protein sequence
MVLPITDKNK ILTLIPQRNP IVMVDALWEY TPTEGVAGLT IIPSNLFVQQ EIFLESGLIE 
HIAQSIALHK GYYYYLNGKP APMGYIGAIK NIEIQSLPKV GDTLKTHITI QQEFMDVTLV
TMQTFIGDTL IAQGEMKTVL APNP