Gene Coch_0545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0545 
Symbol 
ID8366957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand- 
Start bp682892 
End bp683329 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content43% 
IMG OID644982967 
ProductBeta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ 
Protein accessionYP_003140664 
Protein GI256819385 
COG category[I] Lipid transport and metabolism 
COG ID[COG4706] Predicted 3-hydroxylacyl-(acyl carrier protein) dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.333587 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATAT CAATCCACAA ATACCTCCCC CACCGTCCGC CGATGCAAAT GGTAGATACC 
ATTACCGACA TCAGTAATAC ACACGTAGTT ACTGAGTTTG AGGTGAAGTC TACTTGCATA 
TTTGTGGAAG AGGGGAAGTT TGCCGAAGTA GGACTCATTG AGAATATGGC ACAAACCTGT 
TCGGCAATTG TGGGGCAGTT TCTCTTTGGT ATAGAAGACA CATCGAACTA TGTGATAGGT 
TACATCAGTG CGATTAAGAA ATTGGAACTC TTTGCCTTGC CTAAGGTACA AGAGGTCGTG 
CGCACCGAAG CCGAATTGCT TTCTCGTTTC GATACCGATG AGTATTACAT CTGCTCGATG 
CGCTGTAATG CCTTTGTAGG AGATATTCTT ATGGCAACTG CCGAAATGAA CTTAGTAATT 
AAAAACCTAA CGGAATGA
 
Protein sequence
MNISIHKYLP HRPPMQMVDT ITDISNTHVV TEFEVKSTCI FVEEGKFAEV GLIENMAQTC 
SAIVGQFLFG IEDTSNYVIG YISAIKKLEL FALPKVQEVV RTEAELLSRF DTDEYYICSM 
RCNAFVGDIL MATAEMNLVI KNLTE