Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0536 |
Symbol | |
ID | 8366948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 669365 |
End bp | 670735 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 644982959 |
Product | RagB/SusD domain protein |
Protein accession | YP_003140656 |
Protein GI | 256819377 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAG TTATATATAC ACTATTTAGC ATAGCCTTGT TAGCTACAAG CTGTGCCGAC TTAGACCCTA CATTAGAACA AGATAAAGAG TTAGAGGGAA GTATCAAATC TGTAGAAGAC GTTAGGAGTG TTTTAAACTC AGCATATAGC CGTATGAGTA CAAGATATTA CTACGGAAGA GATGTCATTA TTTTCGGAGA GGTGCGTTCC GATAATGCAT ATTCCGACGC AAACTCAAAC CGTTTTATTA CAGTTGCTAA AATGGATATG ACCAAAACAG ATGCTTATGC TTCTGATACT TGGACGCTAA TCAATCAGAC AATAGTATCC ACCAATGTAG TTATTAATGC TGATAGAGCA AAAATTACGG GTGATGTTAC TACGCTGAAT CATTATTTAG GGGAAGCTTA TGCCATTCGT GCTTTAGCGC ATTTTGACTT GTTGAAACTT TACGGTCAAC AATATCAAGA GCCTGACAGA ACAAAGGCGT TAGGCGTTCC TTATACAAAA GTATTTGGGA AAGCCATTTA TCCAGCTCGT GAAACGGTTC AGCGTACCTA TGAGCTTATA ATGGAAGACC TAAATGCAGC CATTAGCAAT TTATCGGCAA GCGAAGACGA TACTTCTGCT CACTACATTA CTACTTTTGC AGCCTATGCA CTCAAAGCTC GTGTAGCTCT TTTCTTTGAA GATTGGGCAA CTGCTCGTGA TGCTGCTAAG TACGTAATTG ATCACAAAGG CTCTCGTTTA GATATTGCAG CTCCCGACGA TTTTGCAAAA ACCTTTACTA CTGATAATAC TAAAAATCAA ATTTTCTCTA TTGCCAATAA TGATAGTGAT AATACTAGTG TCAATAGTTT AGGAAATATT TATTTTGGGT CTTATGGAGA TGTGGTAATG CTCAACGATT TGTATTCAAA ATACGAAACA GGAGATGTTA GAAAGGCTCT TTTTTCCGAA GTAAAAGCTG GTAAAACTTA CAGAATGCGA AAACAAACAG ATCTCATAGG TTCACAAGAT ATTCCTATTA TTCGTTATGA AGAAGTGGTG CTCACCTATG CCGAAGCTCT TTTCCGTTTA GGTGATACTG CAAATGCCCT TGCTCAGCTG AATTTAATAC CAGCAAAACG AAGAGCAACT GCTTATACAT CGGCAACTCT TGAGAATATT TTGTTAGAAA GACGAAAAGA ATTTGCAGGT GAAGGCTTCC GTTTTTATGA TATTGCTCGA AATAAACAAG ATATGCCTCT TGTAGATGAT GCCTTACAAA CTTATGGAAC AGTAACCTAT GGAAGCTATA AATACTCATT CCCTATTCCA AATAGCGAAA TGGGAGCTAA TGGCAATATG GTACAAAACC AAGGTTATTA A
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Protein sequence | MKKVIYTLFS IALLATSCAD LDPTLEQDKE LEGSIKSVED VRSVLNSAYS RMSTRYYYGR DVIIFGEVRS DNAYSDANSN RFITVAKMDM TKTDAYASDT WTLINQTIVS TNVVINADRA KITGDVTTLN HYLGEAYAIR ALAHFDLLKL YGQQYQEPDR TKALGVPYTK VFGKAIYPAR ETVQRTYELI MEDLNAAISN LSASEDDTSA HYITTFAAYA LKARVALFFE DWATARDAAK YVIDHKGSRL DIAAPDDFAK TFTTDNTKNQ IFSIANNDSD NTSVNSLGNI YFGSYGDVVM LNDLYSKYET GDVRKALFSE VKAGKTYRMR KQTDLIGSQD IPIIRYEEVV LTYAEALFRL GDTANALAQL NLIPAKRRAT AYTSATLENI LLERRKEFAG EGFRFYDIAR NKQDMPLVDD ALQTYGTVTY GSYKYSFPIP NSEMGANGNM VQNQGY
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