| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0517 |
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| Symbol | trmB |
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| ID | 8366929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 654746 |
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| End bp | 655432 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644982941 |
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| Product | tRNA (guanine-N(7)-)-methyltransferase |
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| Protein accession | YP_003140638 |
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| Protein GI | 256819359 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0220] Predicted S-adenosylmethionine-dependent methyltransferase |
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| TIGRFAM ID | [TIGR00091] tRNA (guanine-N(7)-)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGAAGCA AAAACAAACT CAAACGCTTT GAAGAAAATA AAACCTTTGC CAATGTAATC
CAACCTTCAC GCAAAGAGCT CCTTAACGGT GCTTTTGCCT ATAAAGGTCG GTGGAACGAA
CTCTTTTTTA AGAACAATCA CCCTATCGTC TTAGAATTGG GTTGTGGTAA AGGTGAATAC
TCAGTGGGCT TAGCCAAACG CTACCCTCAG AAGAATTTTA TAGGTATCGA TATCAAAGGA
GCACGCTTTT GGCGAGGGGC TAAAACTGCT ACTGACGGAA ATATTACCAA TGTAGCCTTC
TTGCGCACCC AAATAGAACT CATCGAATGT TGTTTTGCCC CTGAGGAAGT AAGCGAAATA
TGGATTACCT TCCCCGACCC TCAAATCAAA TACAAGCGCA CCAAGCACCG CCTTACAAAC
GCCGATTTTC TAACGCGGTA TCAGCATATC CTTGCACCTG AGGGTTATAT CCACCTAAAA
ACCGATAGTG AGTTTATGCA CGGCTATACG CTGGGATTGT TACACGGAGC AGGGCATAAA
GTACTCTATG CCAATCACAA CATCTATAAC AGCGACGGTG TACCCGAAGA AGTAACCGAA
ATTAAAACCT TTTATGAGCA GTTCTATTTG GAGCAGAACA AACCTATTAC CTACATTCGC
TTTCAGATAA AAAAAGATAA TAATTAA
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| Protein sequence | MGSKNKLKRF EENKTFANVI QPSRKELLNG AFAYKGRWNE LFFKNNHPIV LELGCGKGEY
SVGLAKRYPQ KNFIGIDIKG ARFWRGAKTA TDGNITNVAF LRTQIELIEC CFAPEEVSEI
WITFPDPQIK YKRTKHRLTN ADFLTRYQHI LAPEGYIHLK TDSEFMHGYT LGLLHGAGHK
VLYANHNIYN SDGVPEEVTE IKTFYEQFYL EQNKPITYIR FQIKKDNN
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