| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0497 |
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| Symbol | |
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| ID | 8366908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 634853 |
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| End bp | 635881 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644982923 |
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| Product | GHMP kinase |
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| Protein accession | YP_003140621 |
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| Protein GI | 256819342 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3407] Mevalonate pyrophosphate decarboxylase |
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| TIGRFAM ID | [TIGR01240] diphosphomevalonate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000421791 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTTCTT TCAAAGCACC AAGTAATATA GCCTTAGTAA AGTATTGGGG CAAGAAGGGA
GAACAGCTCC CTGCGAACCC TTCTATCAGC TTTACACTCA CACATTGTTA TACCGAAACT
TCTATTGAAT ATGAACGTAG GAGTGAGTCT TCTATTGCCT CAGGCGAACC CTTTTCATTC
GATTTTAGCT TTGAAGGACA ACCCAAACCT TCTTTTCACC CTAAAATCCA TACTTTCTTC
GAGCGGATTG TAGCTTACTT GCCTTTCTTA AAGGACTATC ATTTTAGCAT TGCCTCACAT
AATTCTTTCC CTCATAGCAG TGGTATTGCG TCTTCTGCAA GCGCAATGGC TGCCCTCTCG
GTATGCTTAA TGCAGATTTC TAAAGAGTTA GGAGAAACTT ATGCAGAAGA AGCTTTTTGG
CAAAAAGCCT CTTTCTTGGC GCGCTTGGGT TCGGGTAGTG CCTGCCGAAG TGTGCGAGGC
AGTATAGTAG TATGGGGCGA ACACCCTGCC ATTATAGGAA GTTCCGATGA ATATAGTATA
CCCTATCCCC TACCCGTTCA CGAAGTTTTT CAAAATTATC AAGATACTAT TTTGCTCATC
GATAGAGGTC AGAAGCAAGT CAGCAGTACC GTAGGTCATA ACCTAATGCA CGGTCACCCT
TTTGCTGAGG CGCGTTTTGC ACAAGCCAAT GAGAATATCA ATAAACTTGT CAGAAGTTTT
GCTTCCGGTG ATGTAGAGCG TTTCATAGAA GTAGTGGAAA GTGAAGCTCT CACTCTGCAC
GCAATGATGC AAACCAGTAT TCCATACTTT ATTCTGATGC GCCCCAATAC GTTAGAAGTG
ATTCAGCGCA TATGGCAATA TCGTAAAGAA ACAAATATCC CACTTTGTTT TACGCTCGAT
GCAGGGGCTA ATGTACATCT GTTATACCCT AAAACTTCTA CTACGGAAGT AAAATGGTTT
ATAGAAGAGG AATTAGCTCA ATTTTGTGAA GGACGACAAT ATATTCACGA CGAAGTAGCC
ACTATTTAA
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| Protein sequence | MISFKAPSNI ALVKYWGKKG EQLPANPSIS FTLTHCYTET SIEYERRSES SIASGEPFSF
DFSFEGQPKP SFHPKIHTFF ERIVAYLPFL KDYHFSIASH NSFPHSSGIA SSASAMAALS
VCLMQISKEL GETYAEEAFW QKASFLARLG SGSACRSVRG SIVVWGEHPA IIGSSDEYSI
PYPLPVHEVF QNYQDTILLI DRGQKQVSST VGHNLMHGHP FAEARFAQAN ENINKLVRSF
ASGDVERFIE VVESEALTLH AMMQTSIPYF ILMRPNTLEV IQRIWQYRKE TNIPLCFTLD
AGANVHLLYP KTSTTEVKWF IEEELAQFCE GRQYIHDEVA TI
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