Gene Coch_0478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0478 
Symbol 
ID8366889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand+ 
Start bp615509 
End bp616183 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content42% 
IMG OID644982904 
Producthypothetical protein 
Protein accessionYP_003140602 
Protein GI256819323 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.00358452 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCTACGA CAGCCTTATG TTGCACCTCA TTAGCAGTTG CTCAAAACGA TGAAAACCTC 
AACACCGATC GCCCCGACCA AAGTGAAGGG GTATACACCC TGCCCAAAGG TCAGTTTCAA 
ATAGAAAATG GTTTAGTTTT CAGCAAAGAA GAAAGCAGTG ATAACCTAAT GTTACGCTAC 
GGACTCATCA CAAACACCGA ACTCCGATTA GAAGCCGATT TCGACCTCCG TACCCCCGAT 
TTTAGTAGTA CTACTTTCAG CATAAAACAG CGTTTATACG AATCGGAACA GCGTTATATC 
CCCTCAGTGG GACTCATCGG TTATGGACAA TACAGCAAAA CAGACGCTAA GACTTATACT 
TTCGACGCTT GTTTAGCTTT TGAAAGCTCT CTTACCGACC AGCTTTCATT AGCTTATAGT 
GCTCGTAGCT CTGAACAATT TAAGAATTTA GATGTTACTG CTCAGGTCAA TTATGCTCCC 
AACAACAAGC TATGGAGCTT TGTTGAGTAT TACGCTTCCT ATAATGGAAT GCGTGCTCCT 
GAGCACAATA TCAATGCAGG AATTGCCTAT CTCCTAAAAC CTAATTTTCA AATAGACCTC 
AGCGGAGGGC GTACCCTTTG GCAACCAGAA CCTCAATATT TTGTAGGGGT GGGAATAGGA 
TATTTATTCA TTTAA
 
Protein sequence
MATTALCCTS LAVAQNDENL NTDRPDQSEG VYTLPKGQFQ IENGLVFSKE ESSDNLMLRY 
GLITNTELRL EADFDLRTPD FSSTTFSIKQ RLYESEQRYI PSVGLIGYGQ YSKTDAKTYT 
FDACLAFESS LTDQLSLAYS ARSSEQFKNL DVTAQVNYAP NNKLWSFVEY YASYNGMRAP 
EHNINAGIAY LLKPNFQIDL SGGRTLWQPE PQYFVGVGIG YLFI