| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0476 |
|---|
| Symbol | |
|---|
| ID | 8366887 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | + |
|---|
| Start bp | 613883 |
|---|
| End bp | 614287 |
|---|
| Gene Length | 405 bp |
|---|
| Protein Length | 134 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644982902 |
|---|
| Product | DoxX family protein |
|---|
| Protein accession | YP_003140600 |
|---|
| Protein GI | 256819321 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2259] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0125441 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAACA AAGATTTTGG ACTCCTCGTC CTCCGCCTCA CCATAGGCTT GCTTATGCTT
CCTCACGGCA TCAATAAATT ATTACACGCC GATGCCTTTG GATATGTTCA AAGTACCTTA
GTAGCCAAAG GTCTTCCCAC CTTCATTGCC TATGGGGTAT ATCTTAGCGA AATCATCGCT
CCTATAATGA TTGTATTAGG CTTCCGAACC CGTTTAGCCG CTCTTATAAT GGTACTCGGC
GGAATTAGCA CGCTCTTTTT GGCGTATGGA GGTCAAATTA CCGCAGTTAC GGCTCACGGT
GGTTGGGCTC CTGAACTCCC TGGACTATTC CTTTTCGGTG CTTTAGCTTT GTTCTTTACC
GGAAGTGGCA AACACGCCAT TTCCACTCGC CACAAATGGG ATTAA
|
|---|
| Protein sequence | MKNKDFGLLV LRLTIGLLML PHGINKLLHA DAFGYVQSTL VAKGLPTFIA YGVYLSEIIA
PIMIVLGFRT RLAALIMVLG GISTLFLAYG GQITAVTAHG GWAPELPGLF LFGALALFFT
GSGKHAISTR HKWD
|
|---|
| |