| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0472 |
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| Symbol | |
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| ID | 8366878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 602429 |
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| End bp | 603496 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 644982893 |
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| Product | lipopolysaccharide biosynthesis protein |
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| Protein accession | YP_003140596 |
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| Protein GI | 256819317 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3765] Chain length determinant protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAATA ATCATCACAA TACGATAAGA GAAGAAGATG AAATTGATTT GTTACAGCTT
ATCAATAAGC TTTGGAGAGC TAAGAAATCA ATCACTGTAT TTACGTTGAT ATTTATGGTC
ATAGGGATAT TAGTAGCCTT ATTTTCGGCT AAAGAATACA CCGCTACCAC TATTATGGTA
CCACAAGCAA CTGATAGCAA ATCGACAGGA GGATTGGGGG GACTTGCAGC TATGGCAGGG
ATTAATTTAG GAGGAAACAA TGCAGATGCT ATTCCACTTA CTACCTACTC CAAGATTATT
GAAAGTGTTC CGTTTAAAAA GAAATTAGCA CAGACGAAGC TTACTTTTTC AGATATTTCT
AATCCAATTA CCTATGAGCA ATATTGTAAA AATTATGCGA AACCGAGCAT TTTGGGTAGT
GTGATGAGTA TTTTCCGTTC AAACCCTTCT GAACCGTCTA TTAAGGTACA AGATACCACC
CATATTACGA GTATTAGTAA GGAGGAGAGA GCTATCCTTA ATAGTATCGA CAATAATATC
AAGTTGAATT TAAATGAAAA AGAGGGTTAT ATTACGCTAT CGTATGCAAT GCCCGAAGCA
CTTCCTGCGG CACAAATGTT GCAAAGTGCG CAACAGTTAT TGCAAGAAAC AGTAACTGAG
TTTAAATTGC AAAAAGCAAA AGAAGAGTTC GACTTTGTAC AACAACGTTT TATCGAAGCT
GAAAAAGATT TTAAGGCAAA GCAATACGCT GTGGCAGGTT TCCAAGACCG CAATCGTGAC
CTTTTTAGCA ACTTACCTCA AACGCGTTTG CAACAACTAC AAGCTGAGTA TAACTTAGCT
TTTAATGTAT ATACTGAATT AGCTAAACAA CTCGAAACCA AACGTATTAA GATGAAGGAA
GACCAACCAA TATTTACTAT AATTGAGCCT GTGAGTGTAC CTAACGAACG TTCTAAACCC
AAACGAATGA TGATTATTGC CATTTGGACG TTTGTAGGAC TCATTATAGG AATAGGTAAT
GTTTTTCTAA AAGACTTTAG ACAACAACTC AAATCTAATA ACGACTAA
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| Protein sequence | MENNHHNTIR EEDEIDLLQL INKLWRAKKS ITVFTLIFMV IGILVALFSA KEYTATTIMV
PQATDSKSTG GLGGLAAMAG INLGGNNADA IPLTTYSKII ESVPFKKKLA QTKLTFSDIS
NPITYEQYCK NYAKPSILGS VMSIFRSNPS EPSIKVQDTT HITSISKEER AILNSIDNNI
KLNLNEKEGY ITLSYAMPEA LPAAQMLQSA QQLLQETVTE FKLQKAKEEF DFVQQRFIEA
EKDFKAKQYA VAGFQDRNRD LFSNLPQTRL QQLQAEYNLA FNVYTELAKQ LETKRIKMKE
DQPIFTIIEP VSVPNERSKP KRMMIIAIWT FVGLIIGIGN VFLKDFRQQL KSNND
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