Gene Coch_0458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0458 
Symbol 
ID8366864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp586432 
End bp587394 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content41% 
IMG OID644982879 
Productmannose-6-phosphate isomerase, class I 
Protein accessionYP_003140582 
Protein GI256819303 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1482] Phosphomannose isomerase 
TIGRFAM ID[TIGR00218] mannose-6-phosphate isomerase, class I 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATCCAA TAAAATTTAA ACCTATCCTC AAAGAACGCC TTTGGGGAGG CACTAAACTA 
AAAACATTAT TCAACAAACC TATTGAAAGC GATATTACAG GCGAAAGCTG GGAAGTATCA
GGCGTACCTG GTGATATCTC GGTAGTAGCC AATGGTCAGT ACGAAGGTAA AAGTCTGCAA
GAACTCATAG ATTTATACCC TAATGAACTG CTTGGCAAAC ACGTGCACAA GCGTTTTGGT
CACGATTTCC CTATCCTTAT TAAGTTTATA GATGCACGCG AAGACCTCTC TATACAAGTG
CACCCTAATG ATAAATTGGC AAAAGAACGC CACAACTCTT TTGGTAAAAC CGAAATGTGG
TATGTGCTTC ACGCCGATGC AGGAGCTGAA CTGATTGTAG GCTTCAACAA AACAGTAACC
AAAGAAGAGT ATCAACAGCA CCTCAATAGT GGTACTCTCA CCGATATTCT CAATTACGAA
AAAGTGAAAG ATGGCGATAC ATTCTTTATC AACACGGGCA AAGTGCACGC CATAGGCAAG
GGAATTATCA TTGCCGAAAT ACAACAAACC AGCGACATCA CCTACCGCGT GTACGATTTC
AACCGTCGTG ATAAAAATGG TAACCTGCGC GAACTCCACA CTGAACTCGC TCTCGATGCT
ATCGACTACG AGAAAAAAGA CGACTTTAAA GTGGCTTATA CCAAAGACTC TAACACGGTA
AACAAAGTGG TGAATTGTCC TTATTTTATT ACCAATTTGC TACCGCTTAC CGCAAGCTAT
GAAAAACAAC TTTCACAAGA CGATTCTTTC CATATCTATA TGTGCGTAAA AGGCGAAGGT
ATAATAGGTG ATGGTACTAC CGAATTACCT ATCAAGCAAG GTGAAACAGT GCTTTTCCCT
GCTTCTTGCC ACCAATTAGA AGTAAAAACC AAAGGAATGG ATTTATTGGA AGTATATATT
TAG
 
Protein sequence
MYPIKFKPIL KERLWGGTKL KTLFNKPIES DITGESWEVS GVPGDISVVA NGQYEGKSLQ 
ELIDLYPNEL LGKHVHKRFG HDFPILIKFI DAREDLSIQV HPNDKLAKER HNSFGKTEMW
YVLHADAGAE LIVGFNKTVT KEEYQQHLNS GTLTDILNYE KVKDGDTFFI NTGKVHAIGK
GIIIAEIQQT SDITYRVYDF NRRDKNGNLR ELHTELALDA IDYEKKDDFK VAYTKDSNTV
NKVVNCPYFI TNLLPLTASY EKQLSQDDSF HIYMCVKGEG IIGDGTTELP IKQGETVLFP
ASCHQLEVKT KGMDLLEVYI