Gene Coch_0446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0446 
Symbol 
ID8366852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand+ 
Start bp568931 
End bp569662 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content41% 
IMG OID644982867 
Productlipolytic protein G-D-S-L family 
Protein accessionYP_003140570 
Protein GI256819291 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGAA TATTACTGTT GTTATTCCTA TTAGTAACAA CCTTTGCGAG TGCGCAAACC 
GCAACCCCTA CAACCCTTAT CAAAACCGTT ATTCCGTTTG AACAACGCGA CGAAACTTCT 
TGGATTACCC GCTATCAAAA GGATATTACC AACTACCAAA AGGAGAATAA ACGCTTAAAA 
GACCTCTCTT GCGACGTACT CTTTCTGGGG AGTTCATCTA TCAATCTGTG GGATACTATC 
TATGAAGATT TCGCCCCACT GAAACTCATT CGTCGTTCCT ACGGAGGGGC AACCTTGCGC 
GATATGATTT ACAATTACAA CACTATCGCC AAAGGCTATA CCCCTAAAAG CATTTTGTTA 
TACGTGGAAA ACGATTTGGG CAATCATAAG GAAGGTGTAA ATGCTGTGAA GTGTTTTGAC 
CTTTTCCGTA TATTTATCGA CAAGCTCAAA AAAGACTACC CTAATACGCC TCTGATTGTG 
GTATCGCTAA AACCCTCACA ACACAAAGCC GACCAGCTGA AAGACCAGCT ATTGGTAAAC 
GCTCTTTTAG AGGAAAATGC CACCGCACAA GGCTATACTT ATGTAGATAT TACCAAGGTA 
ATGTACGATG AAGCGGGTAA TCTTCGCACT GATATCTTTA AAGAAGACAA CCTACATATG 
AATGCCGAAG GTTATAAGCT CTGGACAGCC ATTCTCAAAC CGCTTCTTAT TAAAAAAGTG 
AGAGGAGAAT AA
 
Protein sequence
MKRILLLLFL LVTTFASAQT ATPTTLIKTV IPFEQRDETS WITRYQKDIT NYQKENKRLK 
DLSCDVLFLG SSSINLWDTI YEDFAPLKLI RRSYGGATLR DMIYNYNTIA KGYTPKSILL 
YVENDLGNHK EGVNAVKCFD LFRIFIDKLK KDYPNTPLIV VSLKPSQHKA DQLKDQLLVN 
ALLEENATAQ GYTYVDITKV MYDEAGNLRT DIFKEDNLHM NAEGYKLWTA ILKPLLIKKV 
RGE