| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0443 |
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| Symbol | |
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| ID | 8366849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 562858 |
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| End bp | 565827 |
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| Gene Length | 2970 bp |
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| Protein Length | 989 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644982864 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003140567 |
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| Protein GI | 256819288 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTAC TCAAAGAACA TTTAATGCTA ATGATGGTAC TGTTAGTAGG CTTTGTAGGT
TTTGCCCAAG CACAATACAG CAGAGTAACA GGTACCGTAA CCGATGACAA AGGAACACCT
CTTCCTGGTG TTTCTGTAGT AATAAAAGGT ACTACCAAAG GCGTAGCTAC TGATTTCGAC
GGTAAGTATA CACTTACTGA AGTAGCTCGA GGAGCTGTTT TAGAGTTTTC TTCTGTAGGC
TACAAAACCC TCGTTTTAAA AGTAACAGGT GAACAGCTCA ATGTCAAACT TCCTGAAGTT
GCCCAAGACC TCGATGAGAT AGTAGTAGTG GGCTATGGTA CTCAAAAACG TGGTGATGTA
ACCACTGCTA TCACCTCAGT AAAGACCCAA GACCTCGACC AACGTCCTGT AACCTCAGCT
GCACAGGCTA TTCAAGGGCG TGCTGCGGGT ATCCAAGTAG TGCAACCTAA TGGTGCTCCA
GGCGCAGGCT TGGCAGTGCG CATTCGCGGG AATACCTCTA TCAGCGCTTC CAACGACCCT
CTATATGTGG TTGATGGTAT CCCTGTGCAA GACATCAGTG GGATTGCCCC TACCGATATT
GAGAGTATGC AAGTACTTAA AGACGCTTCC TCAGCAGCTA TCTACGGTTC ACGTGCTGCT
AATGGCGTAG TGCTTATCAC TACCAAACAC GGAAAACGCA ACGAGCCTAA AGTATCTGTT
AATACTTATG TGGGTATCTC GCAAGTAGCC AAACGCATAG AATCCTTAAA TACGGCTCAA
TACAACGAAC TGATGAAAGA AACAGGTGCT GTTACTCTTC CTTCAGGACT TACCGACAAA
ACCGATTGGT TCGACGAGAC CTTCCGCAAG AGTATTATCC GCAATACACA GCTTTCTTTC
TCAAATGCAA CTGAAAACAC CAAGTATTAC ATTTCAGCAG GTAATTCTAA AGATGAAGGG
GTTATTCGCT CTTCTTTCTT CGAGCGTTAT AATGTACGTT TGAACTTAGA AACCAAAATG
CGTAAATGGC TCACTTTTGA AACCAATCTA TCTTATGCCG ATTACTCGTC TAATGGTATT
ATCACCGGTA CAGGTTCTAA CCGCGCTGGA GTAGTGCTTT CGGTAATCAA TACCCCTAAA
TACGCTCCTA TATGGAGTGA TAAACCCGGT GAAGAAGGTT GGTATTACTA CAATTTCTAT
GGAGCAAACC TCACTCACCC TGTAGAGAAT ATCTCTCGTA ATGCAGACAA TACCTCTAAG
AGCAATCGCT TGGTAGGAAG TGTATCGGCT ATCGTAACTT TCCTCCCTAG TTTGAAGTTC
AAATCTACAG TAGGTATCGA CCGTTTAGGA CGCACTCAAA CCCATTGGAC AGACCCTAAA
CTCACCGAAT ATGGACGTAA GATCTTCGGT ACTGCCGACG ATATCCGTAC TAATAACACC
GTGATGACCT ACGACAACTT GCTTACTTTC GACAAGAGTT TCGGAAAACA CAATCTTTCT
GCTTTGGCGG GTACTTCAGG AACGGTATCT AAATGGAATG AAAGCTATTT GTACGCCTCT
CACTTCCTTA CACCCGACAT CAAAACCCTC AACGCTGCCA ATAAGATAGA ACAAGGTAGT
GGTTCGAGAG CTGCCGAATG GGCAATTATG TCGTATTTAG GTCGTATTTC TTATAACTAC
GATAGTAAAT ATCTTCTCAC GGCTAATTTC CGCGCCGATG GTTCTTCTAA GTTAGCACCA
GGAAAACGCT GGGGTTACTT CCCTTCAGTA TCTGTAGGAT GGAGACTTTC ACAAGAAAAC
TTCTTGAAAG AAGTAGATTG GCTTAGCGAA CTCAAATTGC GCGGTGGCTG GGGACAAACA
GGTAACCAAG CTGGTATATC CGATTACGGC TACTTGCAAC GCTTTTCTAT TACCCGTCAA
AACTGGTGGG AGGCAGGCAA AGGTGATGCA ATGGTAACTT TGCGCCCTAA TTCATTCTCT
AACCCTAACC TCACTTGGGA AACCACCACT CAAAGCAATA TAGGGCTTGA CCTTTCACTT
TTCAAAAACC GTATCTCTTT AGCGGTAGAT GCTTACCTTA AAAAGACTAC CGATTTGCTA
ATGGATGTGC CTCTTCCTGC TACTTCACCA GTGCCCTCTA TCTATCGCAA TGAGGGCGAA
ATGACCAATA AAGGGATTGA ATTTGCGCTT GATACGCGTA ACCTCACAGG AGATTTTACT
TGGAATACTA ATTTCAATAT CTCGTTCAAC CGCAATGAGC TAACTAAACT TACCCTTCAA
AAAGTGTATT ACTATGCCAG CACTTCCGAA GCTATTACTG AACAAGTGGT GCGTATTACC
GAAGGGCAGC CTTTGGGCAA GTTCTGGGGA TTTATAAGTG AAGGCGTAGA CCCTCAAACA
GGCGATATCA AATACAAAGA CCTCAATGGC GATGGTAAAA TCTCAGTGTC CGATAAAACT
TATATAGGCG ACCCTAACCC CGATTTTACT TTTGGGCTTA CTAACGACTT CGCTTATAAA
AACTTTACTC TCAGTGTCTT CTTCCAAGGC TCTTATGGAA ATGATATCTA CAACGCTTCT
CGTATAGAAA CTGAAGGTAT GTACGATGGT AAAAACCAAT CAACAGCGGT ACTCAACCGC
TGGAGAAAAC CTGGTGATAT TACCGACATT CCTCGTGCTG TAAGAAGTAG CGATAACATC
AAAGCTTCTT CACGATGGGT AGAAGATGGT TCGTATTTGC GTCTCAAAAC ACTTACTTTA
GCTTATAACC TCTCCAATGA TGAGTTGTTG AGATACGGTA TCCGCAAGAT ACAGCCTTAT
TTCACCGCTC AAAATCTTTG GACACTCACT AACTACAAAG GATTTGACCC CGAAGTAAAC
CAAGGGCTTT CAGGTCCTAC TATGGGTATT GATTGGGGTA CTTATCCTCA AACCAAAACC
TTTATCTTTG GCTTAAACAT TGATTTTTAA
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| Protein sequence | MKVLKEHLML MMVLLVGFVG FAQAQYSRVT GTVTDDKGTP LPGVSVVIKG TTKGVATDFD
GKYTLTEVAR GAVLEFSSVG YKTLVLKVTG EQLNVKLPEV AQDLDEIVVV GYGTQKRGDV
TTAITSVKTQ DLDQRPVTSA AQAIQGRAAG IQVVQPNGAP GAGLAVRIRG NTSISASNDP
LYVVDGIPVQ DISGIAPTDI ESMQVLKDAS SAAIYGSRAA NGVVLITTKH GKRNEPKVSV
NTYVGISQVA KRIESLNTAQ YNELMKETGA VTLPSGLTDK TDWFDETFRK SIIRNTQLSF
SNATENTKYY ISAGNSKDEG VIRSSFFERY NVRLNLETKM RKWLTFETNL SYADYSSNGI
ITGTGSNRAG VVLSVINTPK YAPIWSDKPG EEGWYYYNFY GANLTHPVEN ISRNADNTSK
SNRLVGSVSA IVTFLPSLKF KSTVGIDRLG RTQTHWTDPK LTEYGRKIFG TADDIRTNNT
VMTYDNLLTF DKSFGKHNLS ALAGTSGTVS KWNESYLYAS HFLTPDIKTL NAANKIEQGS
GSRAAEWAIM SYLGRISYNY DSKYLLTANF RADGSSKLAP GKRWGYFPSV SVGWRLSQEN
FLKEVDWLSE LKLRGGWGQT GNQAGISDYG YLQRFSITRQ NWWEAGKGDA MVTLRPNSFS
NPNLTWETTT QSNIGLDLSL FKNRISLAVD AYLKKTTDLL MDVPLPATSP VPSIYRNEGE
MTNKGIEFAL DTRNLTGDFT WNTNFNISFN RNELTKLTLQ KVYYYASTSE AITEQVVRIT
EGQPLGKFWG FISEGVDPQT GDIKYKDLNG DGKISVSDKT YIGDPNPDFT FGLTNDFAYK
NFTLSVFFQG SYGNDIYNAS RIETEGMYDG KNQSTAVLNR WRKPGDITDI PRAVRSSDNI
KASSRWVEDG SYLRLKTLTL AYNLSNDELL RYGIRKIQPY FTAQNLWTLT NYKGFDPEVN
QGLSGPTMGI DWGTYPQTKT FIFGLNIDF
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