| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0435 |
|---|
| Symbol | |
|---|
| ID | 8366841 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | + |
|---|
| Start bp | 551037 |
|---|
| End bp | 551369 |
|---|
| Gene Length | 333 bp |
|---|
| Protein Length | 110 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 644982856 |
|---|
| Product | transcriptional regulator, PadR-like family |
|---|
| Protein accession | YP_003140559 |
|---|
| Protein GI | 256819280 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1695] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000000949974 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGAAT TTAATGTCGA AAAAACAAGA ACACAGATGC GCAAAGGCAT CTTAGAAATG
TGTATTCTTT CCATTATTGA CAAAAACAAA GAAGCTTACG TTTCCGACCT GATTGAGGCG
CTCAAAACAG CCGATATGAT AGTGGTTGAA GGAACGTTAT ATCCTTTGCT TACCCGATTG
AAAAACAGCG GGTTGCTAAC CTATCAATGG AAAGAATCTA CCTCAGGTCC TCCACGTAAA
TACTACATTC TAACCGAATC AGGCAGACGC TTCCTAAACG AAACCGTAAA AGCCTGGCGT
GACTTACAAA CAATGATTGA TAAAATTATT TAA
|
|---|
| Protein sequence | MEEFNVEKTR TQMRKGILEM CILSIIDKNK EAYVSDLIEA LKTADMIVVE GTLYPLLTRL
KNSGLLTYQW KESTSGPPRK YYILTESGRR FLNETVKAWR DLQTMIDKII
|
|---|
| |