Gene Coch_0430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0430 
Symbol 
ID8366836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand- 
Start bp541931 
End bp542623 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content32% 
IMG OID644982851 
ProductSel1 domain protein repeat-containing protein 
Protein accessionYP_003140554 
Protein GI256819275 
COG category[R] General function prediction only 
COG ID[COG0790] FOG: TPR repeat, SEL1 subfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAAAG CACCATTTTC ATTTAAAGGA CGTATTAGTA GAAAAGAATA CGTCATTACT 
TTTTTAATCA GTTTGGCATA TTACATCATT CTGAGAGCTT ACCTTATAGA CCATATTTTT 
GAGTCTTTTG AGAATGTAAA CACAGCTTTT TTAGTTTATG TATTAGCTTT TGTTCCGTTG 
ATATTTTTTA ACTTAACACA AAGAGTAAAA AGATGTCACG ATTGTGGTAA ATCAGGTTGG 
TATATGTTGA TACCTTTTTA TGAATTCTAT CTATTGGGGG CAGATGGAGA ATTCACAGAT 
AACAAATGGG GTAAAACCTT AAGAAAATCA GCTATAGCCA CTAAACAAGA TGAAGCTGCT 
AAATACTTGG AAAATATGGA AAAAGCACAA GTAGATATTT TCGGAGGAAG CAAAGTTTTA 
GAAAAAGCAG AAAATGGAGA TGCTGAAGCT CAATTTGAAA TGGGATTCCG TTTCTTTGAA 
GGGAGATCTA ACCCTCAATC TTATGAGAAT GCTTTTTTTT GGTGGGAAAA AGCTGCTGCT 
CAAGGAGAAG CAAGAGCTCA ATATAATTTA GGATTTTGCT ACTTAGAAGG TATCTTTGTT 
GATAAAAACC AAGAGAAAGC TATCGAATGG CTTACCAAAA GTAGCAACAA CAATAATAAA 
AAAGCACAAG AATTATTAGC TAAAATTATA TAA
 
Protein sequence
MFKAPFSFKG RISRKEYVIT FLISLAYYII LRAYLIDHIF ESFENVNTAF LVYVLAFVPL 
IFFNLTQRVK RCHDCGKSGW YMLIPFYEFY LLGADGEFTD NKWGKTLRKS AIATKQDEAA 
KYLENMEKAQ VDIFGGSKVL EKAENGDAEA QFEMGFRFFE GRSNPQSYEN AFFWWEKAAA 
QGEARAQYNL GFCYLEGIFV DKNQEKAIEW LTKSSNNNNK KAQELLAKII