| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0423 |
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| Symbol | rplA |
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| ID | 8366829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 533295 |
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| End bp | 533984 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644982844 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_003140547 |
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| Protein GI | 256819268 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000383524 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAAAAT TAACAAAGAA ACACAAAGAA GCTCTTGCAA AAGTTGATAG AAACAAACTC
TATTCATTAA AAGAGGCTTC AGCATTACTC AAAGAAATCA CTTACACTAA ATTTGATGCT
TCTGTGGACA TTGCAGTGCG TTTAGGGGTA GACCCACGTA AAGCAAACCA AATGGTGCGA
GGCGTAGTTA CGCTTCCTCA CGGAACAGGT AAAGACGTGC GAGTGCTTGC CTTAGTAACT
CCAGAGAAAG AAGCAGAAGC TAAAGCTGCT GGAGCTGATT ATGTAGGGCT TGATGAATAT
CTACAAAAGA TAAAAGATGG CTGGACAGAT GTAGACGTAA TCGTTACTAT GCCAGCAGTA
ATGGGTAAGT TAGGTCCTTT AGGACGAGTA TTGGGTCCTC GAGGCTTGAT GCCAAACCCT
AAAACTGGTA CTGTTACTAT GGAAATCGGG AAAGCTGTAC AAGAAGTAAA GTCTGGTAAA
ATCGACTTCC GCGTAGACAA AACAGGTATC GTTCACGCCT CTATCGGTAA AATATCCTTC
ACTGCCGATA AGATTGTAGA CAACGCCAAT GAGTTAATTC AAACATTAAT AAAGATGAAA
CCTACCGCTG CTAAGGGTAC GTATATGAAA TCGATTTATC TTTCATCTAC TATGAGCCCA
AGTATTGCAG TAGATACTAA AACAGTTTAA
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| Protein sequence | MAKLTKKHKE ALAKVDRNKL YSLKEASALL KEITYTKFDA SVDIAVRLGV DPRKANQMVR
GVVTLPHGTG KDVRVLALVT PEKEAEAKAA GADYVGLDEY LQKIKDGWTD VDVIVTMPAV
MGKLGPLGRV LGPRGLMPNP KTGTVTMEIG KAVQEVKSGK IDFRVDKTGI VHASIGKISF
TADKIVDNAN ELIQTLIKMK PTAAKGTYMK SIYLSSTMSP SIAVDTKTV
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