Gene Coch_0421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0421 
Symbol 
ID8366827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp532245 
End bp532796 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content43% 
IMG OID644982842 
ProductNusG antitermination factor 
Protein accessionYP_003140545 
Protein GI256819266 
COG category[K] Transcription 
COG ID[COG0250] Transcription antiterminator 
TIGRFAM ID[TIGR00922] transcription termination/antitermination factor NusG 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000362021 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGGAT TAATAGAAAA AAAATGGTAT GTAATTAAAA CCGTTACCGG TCAGGAGAAC 
AAAATAAAGA ACTACATAGA GAACGAGACC TCACGATTGG GGTATGCGGA CTATGTGGAA
GAAGTATTAG TGCCTACTGA AAAGGTGGTT CAGGTGCGCA ATGGCAAGAA GACCACTAAG
GATAGGGTTC ATATGCCCGG TTATGTAATG GTAAAAGTTC ACTTAGCAGG TGAGGTAGTG
CATATCATTA AGTCTATCCC AGGAGTAGTA GGTTTTTTGA GTGAAACCAA AGGAGGCGAC
CCGCTACCCT TGCGCAAAGC TGATGTAAGC CGTATGCTCG GTCAGGTAGA TGAATTGGCT
GAGACGGTAG AGACGGTAGC GATTCCGTTT GAAGTAGGTG AAATGGTGAA ACTTATAGAT
GGGCCTTTCA ATGGCTTTAA TGCTACCATA GAGCGCGTGA ATGAAGAGAA GCGCAAACTT
GAGGTGATGG TAAAAATCTT TGGACGCAAA ACGCCATTAG AGTTAAGCTA CACTCAAGTA
GAGAAATTGT AA
 
Protein sequence
MSGLIEKKWY VIKTVTGQEN KIKNYIENET SRLGYADYVE EVLVPTEKVV QVRNGKKTTK 
DRVHMPGYVM VKVHLAGEVV HIIKSIPGVV GFLSETKGGD PLPLRKADVS RMLGQVDELA
ETVETVAIPF EVGEMVKLID GPFNGFNATI ERVNEEKRKL EVMVKIFGRK TPLELSYTQV
EKL