Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0421 |
Symbol | |
ID | 8366827 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 532245 |
End bp | 532796 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644982842 |
Product | NusG antitermination factor |
Protein accession | YP_003140545 |
Protein GI | 256819266 |
COG category | [K] Transcription |
COG ID | [COG0250] Transcription antiterminator |
TIGRFAM ID | [TIGR00922] transcription termination/antitermination factor NusG |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000362021 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGGAT TAATAGAAAA AAAATGGTAT GTAATTAAAA CCGTTACCGG TCAGGAGAAC AAAATAAAGA ACTACATAGA GAACGAGACC TCACGATTGG GGTATGCGGA CTATGTGGAA GAAGTATTAG TGCCTACTGA AAAGGTGGTT CAGGTGCGCA ATGGCAAGAA GACCACTAAG GATAGGGTTC ATATGCCCGG TTATGTAATG GTAAAAGTTC ACTTAGCAGG TGAGGTAGTG CATATCATTA AGTCTATCCC AGGAGTAGTA GGTTTTTTGA GTGAAACCAA AGGAGGCGAC CCGCTACCCT TGCGCAAAGC TGATGTAAGC CGTATGCTCG GTCAGGTAGA TGAATTGGCT GAGACGGTAG AGACGGTAGC GATTCCGTTT GAAGTAGGTG AAATGGTGAA ACTTATAGAT GGGCCTTTCA ATGGCTTTAA TGCTACCATA GAGCGCGTGA ATGAAGAGAA GCGCAAACTT GAGGTGATGG TAAAAATCTT TGGACGCAAA ACGCCATTAG AGTTAAGCTA CACTCAAGTA GAGAAATTGT AA
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Protein sequence | MSGLIEKKWY VIKTVTGQEN KIKNYIENET SRLGYADYVE EVLVPTEKVV QVRNGKKTTK DRVHMPGYVM VKVHLAGEVV HIIKSIPGVV GFLSETKGGD PLPLRKADVS RMLGQVDELA ETVETVAIPF EVGEMVKLID GPFNGFNATI ERVNEEKRKL EVMVKIFGRK TPLELSYTQV EKL
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