Gene Coch_0418 details

Gene Information

• Locus tag: Coch_0418
• ID: 8366824
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Capnocytophaga ochracea DSM 7271
• Kingdom: Bacteria
• Replicon accession: NC_013162
• Strand: -
• Start bp: 526950
• End bp: 529067
• Gene Length: 2118 bp
• Protein Length: 705 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 644982839
• Product: PpiC-type peptidyl-prolyl cis-trans isomerase
• Protein accession: YP_003140542
• Protein GI: 256819263

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAGTAC TCGAAAAGAT TAGAAGTAAA ACCGTATTCC TTATTGCGAT TATTGGGCTC 
GCCCTCTTCG CTTTCATCAT CTCCGACTTT ATAGGTAAAG GGCGCTTTAG CAACCATAAC 
CCTAACGAAA TAGGTAGCGT AAATGGCGAA GATGTACCTA TCGATGCATT CCGTCAGCAA 
GTCGAAAATG CTACCCGTCA AGCTAACGGA CAAGTATCTA GCATCGAAGC CGCTAAATAC 
GTCTGGGAAC AAAACGTCCA ACAAATCCTA CTCAACCAAC AAATCGAAAA ATTAGGTCTC 
AGTGTAGAAA AAGACCAGAT TTTGGCAATT CTTGCTAAAA CACCGCTCGC TCAAAACCCT 
CAGTTTGTAA ATGAGTACGG AGTGTTCGAC GCAAATAAAT TCACCAACTA TTTGGCAACC 
CTCAAAAACA CCAATCCACA AGCCTATGCT CAGTGGAAAA TGCAAGAAGA TGCTATTATC 
GAAGATGCTA AACAGCGAAT GTATTTCAGC CTTATCCGCG CAGGTCTCGG CGTTACCAAT 
ACCGAAGCCG AAATGGAATA CCATCAAGAA AAAGACCTCG CCGATATCAG CTATGTAGCG 
TTGCAATACA GCTCTATCGA TGATAAAAGC GTAAACGTAA CCGATAGCGA GATACAAGAT 
TATATCAAGA AACACGAAAA ACAATTTAAG CAAGAGGCTT ATCGCAATAT CCAATATATA 
GTAGTGAGCG AAAAACCATC GCAAACCGAT ATTGAAACCG AAAAAGAAAG CCTACTCAAG 
CTCTTACAAC CCGAAGTAGT GTTTAACAGC AAAACCAATA AAAACGATAC TATTGCAGGC 
TTTGCTAAAA CAAAAAATAT CAAAGATTTC GTAGACCGTC ATTCCGATGT GCCTTACGAT 
AGCACTTTTG TAAATAAAGA CAATCTTCGT TCTTCTTACG CCGATACTCT TTTCAACCTT 
CCGGTAGGTA AAGTGTTCGG TCCTTATGAA GAAGATGGAA GCCTCAAACT CAGCCGTATG 
ATTGCCAAAC AACCAGGCGG AGCTGTAAAA GCAAGCCATA TTCTTATAGC CTACACCGGC 
AGTCAGGCAG CTACGCCTAA TACTACCCGT ACTAAGGAAG AAGCTAAGGC AAAAGCCGAA 
GAGCTTTTAG CTCAAGCCAA AGCAGCAGGT GCTGATTTTG CGCAACTCGC TCGTGAAAAT 
TCCGAAGAAC CAGGAGCTGT TTACAGTGCA GGCGACCTCG GGTTCTTCTC CAAAGGCGCT 
ATGGTAAAAC CTCTTGAAGA ATTTGCTTTC AACAATGCTG TAGGTACTAT TGGTATAGTA 
GAAACCGCTT TTGGTTTCCA CGTAGTAAAA GTAACTGATA AAGCCGAAGC AGTGAACATC 
GCTACTATCA GCCGTAAAGT AGACCCTTCC GAAGCGACTA TCAACTCTCT TTTCTCTAAG 
GTAACCAACT TCGAAATGAA GGCAGCTCAA AACCCCAAAG AGTTTGCTAA TATCGCTAAG 
AAAAGTGAAC TTTCAGTGCT CCGTGCCGAT AACCTACATA AGAACGACGA CCAGATCATA 
GGCTTGGGCT CTAACCGCTC TATCGTACAA TGGTTGTTCC AAAAGGATAC TAAAATAGGC 
GATATCAAGA AATTCACTAG TGGTGGTAAC TATATTGTAG CCCAATTGGT AAAACAAGGC 
GAAGAAGGTA TTAGCTCAGT ACAAGATGCT GCTCCTATGG TAAAACCAAT TCTCATTCGC 
GAGAAAAAAG CCGCTATCTT AAAAGAGAAA GCCAAAGGCA ATAGCCTCGA AGCTATCGCT 
TCAGCTAACA AAACCGAAGT GAAAAGCGCT GCCAACCTTA TAATGAAAAA TCCAACTATC 
ATAGGCGAAG GACGCGAACC TAAAGTAGTA GGTGCTGCCT TCGGACTCAA ACAAGGTCAG 
CTTTCTAAAC CTATCGACGG CGAAAATGCG GTATACGTAA TCCAACTTAC CTCAGCTACC 
GTAGCTCCTG CATTGGATAA CTACAAAACC TATGCTGAAA CTGTTGAGAA ACTCCGCACC 
GACCGTGCTG CTCAAGGTAT TCTCAAATCA TTGGAAAGCA CTGCCACCAT TAAAGAAAAC 
CTAAGCCTTT TCTATTAG 

 

Protein sequence

MAVLEKIRSK TVFLIAIIGL ALFAFIISDF IGKGRFSNHN PNEIGSVNGE DVPIDAFRQQ 
VENATRQANG QVSSIEAAKY VWEQNVQQIL LNQQIEKLGL SVEKDQILAI LAKTPLAQNP 
QFVNEYGVFD ANKFTNYLAT LKNTNPQAYA QWKMQEDAII EDAKQRMYFS LIRAGLGVTN 
TEAEMEYHQE KDLADISYVA LQYSSIDDKS VNVTDSEIQD YIKKHEKQFK QEAYRNIQYI 
VVSEKPSQTD IETEKESLLK LLQPEVVFNS KTNKNDTIAG FAKTKNIKDF VDRHSDVPYD 
STFVNKDNLR SSYADTLFNL PVGKVFGPYE EDGSLKLSRM IAKQPGGAVK ASHILIAYTG 
SQAATPNTTR TKEEAKAKAE ELLAQAKAAG ADFAQLAREN SEEPGAVYSA GDLGFFSKGA 
MVKPLEEFAF NNAVGTIGIV ETAFGFHVVK VTDKAEAVNI ATISRKVDPS EATINSLFSK 
VTNFEMKAAQ NPKEFANIAK KSELSVLRAD NLHKNDDQII GLGSNRSIVQ WLFQKDTKIG 
DIKKFTSGGN YIVAQLVKQG EEGISSVQDA APMVKPILIR EKKAAILKEK AKGNSLEAIA 
SANKTEVKSA ANLIMKNPTI IGEGREPKVV GAAFGLKQGQ LSKPIDGENA VYVIQLTSAT 
VAPALDNYKT YAETVEKLRT DRAAQGILKS LESTATIKEN LSLFY