Gene Coch_0414 details

Gene Information

• Locus tag: Coch_0414
• Symbol: engB
• ID: 8366820
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Capnocytophaga ochracea DSM 7271
• Kingdom: Bacteria
• Replicon accession: NC_013162
• Strand: -
• Start bp: 524039
• End bp: 524641
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 644982835
• Product: ribosome biogenesis GTP-binding protein YsxC
• Protein accession: YP_003140538
• Protein GI: 256819259
• COG category: [R] General function prediction only
• COG ID: [COG0218] Predicted GTPase
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATAAAAA AAGCTGAATT TGTGATGAGT AACTCTCAGG TGAGTAAGTG CCCAAAGGAT 
AACTTACCTG AGTATGCTTT TATAGGGCGT TCTAATGTTG GGAAATCGTC GCTCATCAAT 
ATGCTTACCA ATCACAAGAA TTTGGCTAAA ACTTCGGGTC GTCCGGGGAA AACTCAACTC 
ATCAATCACT TTAAAATAGA CAATAGTTGG TTTTTAGTAG ACCTCCCTGG TTATGGGTAT 
GCAAGAGTGT CCAAAGAAAC TAAAAAGGTA TTTCAGCAAT TTATTACTAA ATATTTTGAG 
GAGCGGCAAC AATTGGTATG TGCATTTGTA TTAGTAGATG TGCGCCACGA ACCTCAGAAG 
ATAGATGTAG AGTTTATGCA ATGGTTAGGC GAACACGGCA TTCCGTTTGC TATTGTCTTC 
ACCAAAGCCG ATAAACTCAA ACCTTTAGCT ATTGAGCGCA ATATAGCTGC TTATCAACAA 
GTACTCCTCG AAACTTGGGA AGAATTTCCA CCCTACTTCA TCACTTCAGC CGAAAACAAA 
ACCGGCAAAG AAGAACTTAC CCATTACATT GAACAAATCA ATAAATCAAT TGACAATTGT 
TAA 

 

Protein sequence

MIKKAEFVMS NSQVSKCPKD NLPEYAFIGR SNVGKSSLIN MLTNHKNLAK TSGRPGKTQL 
INHFKIDNSW FLVDLPGYGY ARVSKETKKV FQQFITKYFE ERQQLVCAFV LVDVRHEPQK 
IDVEFMQWLG EHGIPFAIVF TKADKLKPLA IERNIAAYQQ VLLETWEEFP PYFITSAENK 
TGKEELTHYI EQINKSIDNC