Gene Coch_0413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0413 
Symbol 
ID8366819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand+ 
Start bp523068 
End bp524021 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content42% 
IMG OID644982834 
Product5,10-methylenetetrahydrofolate reductase 
Protein accessionYP_003140537 
Protein GI256819258 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0685] 5,10-methylenetetrahydrofolate reductase 
TIGRFAM ID[TIGR00676] 5,10-methylenetetrahydrofolate reductase, prokaryotic form 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAA CAGACCATAT TAAGAAAGCA AAAGGGAAGA CGCTCTTTTC CTTTGAAGTA 
GTTCCTCCTA AAAAGGGGAA TAATATTGAA GAACTATATC GGAATATAGA CCCTCTAATG 
GAGTTCAATC CTCCGTTTAT AGATGTAACT ACCTCACGCG AGGAGTATTA TTACATTGAA 
CACCCTAATG GGCTATTGGA AAAGAAAGTA ACCCGTATGC GCCCTGGTAC GGTGGGTATT 
TGTGCGGCTA TTCAACATAA ATACAAGGTA GATACAGTAC CTCACGTGCT TTGTGGTGGT 
TTTTCAAAGG AAGAAACTGA GTACCTTTTG GTAGATTGCC TCTACTTGGG TATTGACAAC 
GTAATGGCTT TGCGCGGTGA TGCGATGAAA GAACAACGCT ACTTTCAGCC TACTGAGGGC 
GGACATACCT ACGCTACCGA ACTCGTTACT CAAATCAGCA ATTTGAACAA GGGGATTTAC 
CTCAACGGCA TTGCTGCCGA CCATAAGGCT AATTTCTGTA TAGGAGTAGC GGGGTATCCT 
GAAAAACACA TTGAAGCTCC CTCACTCACC TCGGACTTGG CGCGCCTTAA AGAAAAGGTA 
GATGCTGGTG CCGACTATGT AGTAACACAG ATGTTTTTCG ACAATCAGAA GTATTTTGAG 
TTTGTAGAGA AAGCCAAAGA AGCGGGCATC AATGTGCCTA TCATACCAGG GATTAAACCT 
ATTGCTATTA AAAAGCACCT CAACCTGCTT TCACAAGCCT TTAAAATAGA CTTCCCCGAA 
GAGCTCATCA AAGCAGTAGA AGCCTGCAAA AACAACGCCG ATGTAAAACA AGTGGGTATA 
GAGTGGGCAA TTCAGCAGAG CAAAGAGCTC AAAGTCGCTG GGGTACCTGT TTTGCACTAT 
TATTCAATGG GAAAATCGGA TAATATAGTG AAAGTAATAT CAGAAGTATT CTAA
 
Protein sequence
MKITDHIKKA KGKTLFSFEV VPPKKGNNIE ELYRNIDPLM EFNPPFIDVT TSREEYYYIE 
HPNGLLEKKV TRMRPGTVGI CAAIQHKYKV DTVPHVLCGG FSKEETEYLL VDCLYLGIDN 
VMALRGDAMK EQRYFQPTEG GHTYATELVT QISNLNKGIY LNGIAADHKA NFCIGVAGYP 
EKHIEAPSLT SDLARLKEKV DAGADYVVTQ MFFDNQKYFE FVEKAKEAGI NVPIIPGIKP 
IAIKKHLNLL SQAFKIDFPE ELIKAVEACK NNADVKQVGI EWAIQQSKEL KVAGVPVLHY 
YSMGKSDNIV KVISEVF