Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0405 |
Symbol | |
ID | 8366811 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 514619 |
End bp | 515305 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644982826 |
Product | hypothetical protein |
Protein accession | YP_003140529 |
Protein GI | 256819250 |
COG category | [R] General function prediction only |
COG ID | [COG1611] Predicted Rossmann fold nucleotide-binding protein |
TIGRFAM ID | [TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1 [TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAC ATTCAAAAGT TTGGAACGAA ACTAAAACAC ACGACGCTTG GTCGATATTT AAAATAATGG GAGAATTTGT ACACGGCTAT GAGCAGATGA GCTCCATAGG ACCTTGTGTA TGTATTTTTG GTTCGGCACG TATTAAGCCT GAAACACCTT ATTACGAACT CACTGTGCGT ATTGCCCAAA AGATAGTAGA TGAAGGCTTC GGTATTATAA CCGGCGGTGG ACCTGGTATT ATGGAGGCGG GCAACAAAGG TGCGCACCTA AACAAAGGTG TATCGGCAGG ACTGAATATT GATTTGCCTT TCGAGCAGAC GAATAACTCT TATATCGACC ACGACAAGAA TATTAAATTC AACTACTTCT TTGCGCGTAA GGTGATGTTT GTAAAGTATT CTAAGGCATT TGTAGCAATG CCTGGGGGCT TTGGTACCCT CGACGAACTC TTCGAGACCC TCACTCTCGT GCAAACTTAT AAAATAGACA AAATTCCTAT TATTTTAGTC GGTACAGATT ATTGGAGCGG ACTTGTAGAC TGGATAAAAA AGATATTATT AGAGAAATTT AATAATATTA GTGCTGAGGA TTTGGATTTG TTTCACTTAG TAGACACCGA AGACGAAGTG ATTAAAGTCA TTGAAGATTT CTACAACAAC AAACAACAGT TAAAACCAAA TTTTTAG
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Protein sequence | MKKHSKVWNE TKTHDAWSIF KIMGEFVHGY EQMSSIGPCV CIFGSARIKP ETPYYELTVR IAQKIVDEGF GIITGGGPGI MEAGNKGAHL NKGVSAGLNI DLPFEQTNNS YIDHDKNIKF NYFFARKVMF VKYSKAFVAM PGGFGTLDEL FETLTLVQTY KIDKIPIILV GTDYWSGLVD WIKKILLEKF NNISAEDLDL FHLVDTEDEV IKVIEDFYNN KQQLKPNF
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