Gene Coch_0404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0404 
Symbol 
ID8366810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp512433 
End bp514577 
Gene Length2145 bp 
Protein Length714 aa 
Translation table11 
GC content42% 
IMG OID644982825 
Productdipeptidyl-peptidase 7 
Protein accessionYP_003140528 
Protein GI256819249 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAGT TTATCTCTTT ATTACTTTTT AGCTTTTACT TGTTACCTGT TACCTTAACG 
GCACAGCAAG GCGGTATGTG GATTCCTTCG CTTTTGGAGG GTATGAATGC CAGAGAAATG
AAGTCCTTAG GTATGAAAAT GTCGGTGAGT GATATTTATA GCGTCAATAA GTCGAGCTTG
AAAGACGCCG TGCCTCATTT CAATGGAGGC TGTACTGCCG AAATGATTTC GGATAAAGGG
CTACTGCTCA CTAATCACCA TTGTGGCTAC GGACAGATAC AAGCGCATTC CTCAGTGCAA
AACGATTACC TTACCGATGG TTTTTGGGCT AAAAATCTAT CGGAAGAGTT GCCTAACAAG
AATTTAGAAG TTACTTTTAT TGTACGTATT GAAGATGTTA CCCAAAAAGT ACTCGCCGAT
ACTCAAAACC TAAGTAGTGA GAGCGTTCGC GCCTCTCAGA TAGAACGCAA TATTGCCTCT
TTGGTGAAAA ACTCGCCTAA AGAAGCGTGG CAAGAGAATC GGGTTCGTGC TTTCTACGAG
GGCAATCACT ATATCCTTTT TGTAGTAGAA ACTTTTAAAG ATGTGCGTTT AGTAGGTGCA
CCGCCTTCGG CTATAGGCAA ATTTGGTTCG GATACCGATA ATTGGGTATG GCCTCGCCAT
ACGGGTGACT TCTCGCTTTT CCGTGTATAC GCCGATAAAA ACAACCGCCC CGCAGCCTAC
TCCAAAGACA ACGTGCCCTA TCGCCCCAAA CACTTCTTTC CTATCTCGCT AAAAGGAGTG
AAAGCAGGCG ATTTTACAAT GGTCTTCGGT TATCCAGGTC GTACTGAAGA ATATTTACCT
GCCGTAGCAG TGGAACAAAT TGTGAATGTA CTGAATCCTG CTAAGATAGG CATTCGCGAT
GTGGTGCTCA AAGTGCAAGA CGGCTTTATG CGCAACAGCA ACGAAATAAA AATAAAATAC
GCCTCTAAAT ACGCCAGTGT TGCCAACTAT TGGAAAAAGT GGATAGGTGA AACACAAGGG
TTGAAAAAAT CGGATGCGGT AGCTATCAAA CGCGCTCAAG AACAGAAATT TCAAAAAGAG
ATAGAAAAAG CAGGTAAAAC TGCTGAATAT GGTTATATTT TACCTCAGTT TACTGAAAAA
TACGCTCAAA TACAAAACTA TGCTTTGGCA GTAGACCTCT TTTCGGAGTT GGTACAGCGC
AATATCGACT TGCTGGCAAA TGGCTATAAA ATCCTTCAAC TGCAAAATGC GCTGCACGAG
AAAGGAACAC AATCGTTCAA CGACCGCAAG AAGACCCTTT TAAACAACTT TGAAACGGTA
TTTAAAAACT ACGATGTGAA TGTAGATAAA GCCGTATTTG AAAAAGCAGT AGTGTATTAT
GCTCAGGCGA TGCCTAAAAC GCTACTCTCG CCTAACTTAC AACAGTTTGA GATACACACA
TTGGCTGACA AACTCTATAA AGAGTCGTTT TTGGCTTCTA AAACCGAAAT GGGAAAAGTA
CTCAACCTAC CTGATGAAGC TTTTGAAAGG CGCCTCAAAA ATGACATAGG CGTACAATTT
GTACAGCAAA TTGTCGCTCA TTTCTACGGA ACTGTAGTGC CTACTTACCG ACAGTTGGAC
AGCGAGATTA CCACCTTACA ACGTACTTAT ATGAAGGCTA TCTTGGAGTT CTCGAAACCT
CAAGACCGCA TTTTCCCTGA TGCCAATAGC ACTTTGCGCG TTACTTATGG CAAGGTAGCG
GGTTACTCAC CTTCGGATGC TATAACCTAT GATTATATGA CTTATTTAGA CGGTGTAATG
GAGAAATACG TGCCTAACGA CTACGAATTT AATGTGCCCG CCAAACTGCG CGAGCTCTAT
GAGAAAAAAG ACTATGGTAT TTACGGCAAA AACGGCAAGA TGCCTGTGTG TTTTATAGCA
ACCAATCACA CCACGGGAGG CAACTCAGGC AGTCCTGCGA TAGACGCACA AGGTAACCTT
ATCGGTCTCA ATTTCGATCG TGTGTGGGAA GGCACAATGA GCGATATCCA CTACGACCCT
AAAATATGTC GCAATATTAT GGTAGATATT CGCTATGTGC TGTTTATCAT TGATAAATAC
GCCGGAGCAG GATATTTGCT AAATGAGATG AAGATAGTGA AATAA
 
Protein sequence
MKKFISLLLF SFYLLPVTLT AQQGGMWIPS LLEGMNAREM KSLGMKMSVS DIYSVNKSSL 
KDAVPHFNGG CTAEMISDKG LLLTNHHCGY GQIQAHSSVQ NDYLTDGFWA KNLSEELPNK
NLEVTFIVRI EDVTQKVLAD TQNLSSESVR ASQIERNIAS LVKNSPKEAW QENRVRAFYE
GNHYILFVVE TFKDVRLVGA PPSAIGKFGS DTDNWVWPRH TGDFSLFRVY ADKNNRPAAY
SKDNVPYRPK HFFPISLKGV KAGDFTMVFG YPGRTEEYLP AVAVEQIVNV LNPAKIGIRD
VVLKVQDGFM RNSNEIKIKY ASKYASVANY WKKWIGETQG LKKSDAVAIK RAQEQKFQKE
IEKAGKTAEY GYILPQFTEK YAQIQNYALA VDLFSELVQR NIDLLANGYK ILQLQNALHE
KGTQSFNDRK KTLLNNFETV FKNYDVNVDK AVFEKAVVYY AQAMPKTLLS PNLQQFEIHT
LADKLYKESF LASKTEMGKV LNLPDEAFER RLKNDIGVQF VQQIVAHFYG TVVPTYRQLD
SEITTLQRTY MKAILEFSKP QDRIFPDANS TLRVTYGKVA GYSPSDAITY DYMTYLDGVM
EKYVPNDYEF NVPAKLRELY EKKDYGIYGK NGKMPVCFIA TNHTTGGNSG SPAIDAQGNL
IGLNFDRVWE GTMSDIHYDP KICRNIMVDI RYVLFIIDKY AGAGYLLNEM KIVK