Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0398 |
Symbol | |
ID | 8366804 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 504854 |
End bp | 505906 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644982819 |
Product | thiamine-monophosphate kinase |
Protein accession | YP_003140522 |
Protein GI | 256819243 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0611] Thiamine monophosphate kinase |
TIGRFAM ID | [TIGR01379] thiamine-monophosphate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAGAAG ATAAAACGCC TCACCGTACC TCATTAGCCG ATTTGGGTGA ATTTGGACTC ATCGACCGCC TAACGAAGGG ATTTGAAATT CACAATCCTT CCACTCTTAA AGGCGTAGGC GACGATGCGG CGGTAATGGA TTTTAAAAAT AAAAAAACTG TCGTCTCTAC CGACCTGCTT ATTGAAGGTG TACATTTCGA CCTTAGCTAT GTACCGCTGA AGCATTTAGG ATACAAGTCG GTAGTAGTGA ACGTATCGGA TATCTATGCG ATGAACGCTA CGGCTACCCA GATAACCGTA TCGATAGCGG TATCCAATCG CTTTCCGTTG GAAGCCTTAG AAGAACTCTA TGCGGGTATT CGCCTAGCCT GCAAGCATTA TAAGGTAGAC TTAGTAGGAG GCGACACGAC CTCATCTACA CGCGGACTCA TCATCTCGGT AACGGCGATA GGTGAAGCGG AAGCATCGGA CTTAGTATAT CGTAACGGAG CGCAACCTAA CGACCTTGTG GTACTCACGG GCGATATAGG GGGTGCCTAT ATGGGTTTAC AGATATTGGA ACGCGAAAAG GCGGTCTTTC AGGTAAACCC AAACTCTCAA CCCGATATAG AGATGTATTC TTACATTTTG GAACGCCAGC TCAAACCCGA AGCCCGCAAG GACATTCCGC CACTGCTCAA ACAATTAGGT GTAAAACCTA CTGCTATGAT GGATGTAAGC GACGGATTGT CGTCAGAGAT ATTGCACATT TGCAAACAAT CGGGGGTAGG TTGTAGGTTA TATGAAGACA AAATACCGCT TGACCCACAA GTGATTAGCA CTTGTGAGGA GTTCAATTTA GATAGCACTA CCATAGCCCT AAGTGGCGGT GAAGACTACG AACTGCTGTT TACTATTGCC CAAGCAGATT ACGATAAGAT AAAAGGCAAT CCTAATTTCA CGGTCATAGG TTACATTACC GATAAAAGCG AAGGGGTAAA CCTCGTCACC CGTGCAGGAC AGTTTATACC GATTATAGCA AAAGGGTGGA ACGCTTTAAC AATTAACAAT TGA
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Protein sequence | MIEDKTPHRT SLADLGEFGL IDRLTKGFEI HNPSTLKGVG DDAAVMDFKN KKTVVSTDLL IEGVHFDLSY VPLKHLGYKS VVVNVSDIYA MNATATQITV SIAVSNRFPL EALEELYAGI RLACKHYKVD LVGGDTTSST RGLIISVTAI GEAEASDLVY RNGAQPNDLV VLTGDIGGAY MGLQILEREK AVFQVNPNSQ PDIEMYSYIL ERQLKPEARK DIPPLLKQLG VKPTAMMDVS DGLSSEILHI CKQSGVGCRL YEDKIPLDPQ VISTCEEFNL DSTTIALSGG EDYELLFTIA QADYDKIKGN PNFTVIGYIT DKSEGVNLVT RAGQFIPIIA KGWNALTINN
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