Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0390 |
Symbol | |
ID | 8366796 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 497217 |
End bp | 498437 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644982811 |
Product | protein of unknown function DUF214 |
Protein accession | YP_003140514 |
Protein GI | 256819235 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACATAC AAAATCTTTT TAAAATAGCG TGGCGTGCCC TTTTGCTGAA CAAAACAAGG GCGATGCTTA CAATGCTGGG CATCATCATT GGGGTGGGCT CAGTGATAAC AATGCTTGCC ATTGGCGAGG GTTCTAAAAA GAGTATCAAA GAGAATATCT CTAAAATGGG TACCAATATG CTCAATATCC GTCCGGGTGC CGGTATGATG GGCGGGGTGC GTATGAGTAT GAGCGATATG CAATCGCTGA AAATGACGGA TTACGAAGCC CTTAAAAAAG AAGGTACCCT ACTGAAATAT GTATCCCCGG TAGTGAGTGG CAACGGACAA AGTATAGCGG GCGGCAACAA CTGGCCTACC TCTATCTACG GCGTGAATAC CGAATACTTG CCTATACGCG AATGGAGTGT GGCTGAAGGG AGTATGTTTG GTGAAGATGA GATTACTAAT TTTTCTAAGG TAGCCGTGAT AGGGCAAACA GTGGCTAAGA ACCTCTTTAC TAATGGCGAA AACCCTATTG GGCAAACCAT ACGCTTTAAG AATATCCCTT TTAAAGTGAT TGGTATCCTT ACGAAAAAAG GTGAAAGCAA CTTTGGTCAA GACCAAGACG ATGTGATTAT CGCCCCTTAT ACTACGGTAC AAAAGCGTAT TTTGGCGCAA ACATTCTTGC AGAGTATTGT GGCTTCGGTG CTCAATGAAA GTCAGTCGGA GAATGCGGTA AACCAAGTTA AGAAGATTTT GGAGCGCACG CATAACCTTT CGGCTACACA AGAAAATGAT TTCAATGTGT TTTCGCAACA AGAGCTCATC AGTACGTTTA GCTCTACCAG CGAGATGCTT ACCGTGTTGT TGGTAGCTAT TGCCAGCATT TCGCTCATCG TAGGGGGAAT AGGCATTATG AACATTATGT ACGTATCAGT AAAAGAGCGC ACTAAGGAAA TAGGCTTGCG TATGGCTATT GGGGCTAAGG GCAAGGATAT TTTGGCACAA TTCCTTATCG AGTCGGTGCT TATTAGCATC ACTGGGGGGG TATTAGGGGT AATTATTGGT TTATTAGCAA CGGTAGGCGT ATCGCTGTTT ATAGGTTGGC CAGTGAGTAT CACCTTGTAT TCTATTGTAA TATCCTTCTT AGTATGTACT ATTACAGGGG TGTTCTTCGG TTGGTACCCT GCTCGCAAAG CAGCCGAGTT AGAACCTATT AGTGCTCTCA GATACGAATA G
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Protein sequence | MNIQNLFKIA WRALLLNKTR AMLTMLGIII GVGSVITMLA IGEGSKKSIK ENISKMGTNM LNIRPGAGMM GGVRMSMSDM QSLKMTDYEA LKKEGTLLKY VSPVVSGNGQ SIAGGNNWPT SIYGVNTEYL PIREWSVAEG SMFGEDEITN FSKVAVIGQT VAKNLFTNGE NPIGQTIRFK NIPFKVIGIL TKKGESNFGQ DQDDVIIAPY TTVQKRILAQ TFLQSIVASV LNESQSENAV NQVKKILERT HNLSATQEND FNVFSQQELI STFSSTSEML TVLLVAIASI SLIVGGIGIM NIMYVSVKER TKEIGLRMAI GAKGKDILAQ FLIESVLISI TGGVLGVIIG LLATVGVSLF IGWPVSITLY SIVISFLVCT ITGVFFGWYP ARKAAELEPI SALRYE
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