Gene Coch_0388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0388 
Symbol 
ID8366794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp495136 
End bp495975 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content38% 
IMG OID644982809 
ProductAbortive infection protein 
Protein accessionYP_003140512 
Protein GI256819233 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAACCA ATAAAAAAAC ACTACGGAAT GTAATCCTAT TTAGCTTGGT AGCTATCTCT 
TGCGGATGGA TAGGCATTGG GGTAAACCAA TTACTTGGTG AGCCTTCTAA TTTAGAGTCT
TTGGGATCAG GGATTTTTAT TGTTACTCCT ATTGTGTGTA TGATTTTGCT TCGCCTTTTC
GGTGGCGATG GTTGGAAAGA TTTCCCTTTA AAACCTCGTT TCAAGCAAAA CACTCGCTGG
TATATCTTTG CTATTGCAGT CTATCCCGTG GTTGTTGGTA TAACAATGTT TGTTGGCAAG
CTATTAGGTT GGGTAGATGC GAGTAAGTTT AGTGTTGCTG CCTATCTCCC TGTTTTTGCT
ACTGCTTTCT TACCCATTTT TATCAAAAAT ATCTTAGAAG AGACGGCTTT TCGGGGGTAT
CTCACCGTAA AAATGGAACA ACTCGTCAAA AATGAATGGT TGATTTATTT AGTGGTGGCA
TTTGTCTGCC AAATATGGCA TCTGCCATAC AACCTCATAT TCTTAGACGA TGCTTATATG
GCAACCTTTT TTCCTTATAG CAAAGAGCTA TTTGTTTTAG TGAGCTTTGT GGTTATTGCT
GTTTGGACAA TAATGTACAC TGAGATTTTC TTTCTCTCGC GCTCGCTCTT ATTGGTAATT
TTGATGCACT CAATGAAAGA CGCTCTTAAT CCTCTCATTT CAGAAGGATT TACTATTATT
TCAGCCGATA AAACACTTTT AGTATCTCCT CTTTTTGGTC TCATCCCAAC ATTGATGTAC
TTAGCTATAG GCTTGTATTT AAGAAGAATA CGCAAAAGTA AAGAACGCCT TCATTCATAA
 
Protein sequence
MRTNKKTLRN VILFSLVAIS CGWIGIGVNQ LLGEPSNLES LGSGIFIVTP IVCMILLRLF 
GGDGWKDFPL KPRFKQNTRW YIFAIAVYPV VVGITMFVGK LLGWVDASKF SVAAYLPVFA
TAFLPIFIKN ILEETAFRGY LTVKMEQLVK NEWLIYLVVA FVCQIWHLPY NLIFLDDAYM
ATFFPYSKEL FVLVSFVVIA VWTIMYTEIF FLSRSLLLVI LMHSMKDALN PLISEGFTII
SADKTLLVSP LFGLIPTLMY LAIGLYLRRI RKSKERLHS