| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0381 |
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| Symbol | |
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| ID | 8366787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 485080 |
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| End bp | 485991 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644982802 |
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| Product | tyrosine recombinase XerD |
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| Protein accession | YP_003140505 |
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| Protein GI | 256819226 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTGGCGTA AAGTAAATAC CGATTATCAG AATTATTTGC GATTACAACG TGGTTTATCG
CAGAATACTG TTGTGTCTTA TGGCTTAGAT ATTGAGAAAC TCATAGGGTA TTTGGAAAAA
TACAATATCA CTGAACCCCC CGATACTATT CAAGTAGATA CCTTGCGCCA GTTCGTATAC
GAAGTTTCCA AAGAACTCAA CGCACGTTCA CAAGCCCGAC TCATATCGGC TTTAAAGAGT
TTTTTTAAGT TTATGATTTC TGAGAAAGGA CGTGAAGACT TTCCTATGAG CCTTATCGAC
AGCCCTAAAA TAGGCGTGAA ACTCCCCGAT ACACTTTCCT TAAAAGAAAT AGATGCTATG
CTCGCCTCTA TAGACCTCAG CACCGATGAG GGGCATCGTA ATAAAGCTAT TATAGAAACG
CTTTACGGTT GTGGATTGCG AGTGTCGGAA TTGGTCTCTC TCCGTCTATC CGACTTGTTT
TTTGAAGAAG ATTTCATTAG AGTAATGGGG AAAGGTAGTA AACAGCGCTT AGTGCCTATT
GAAAGCTATA CGCAGAAACA AATTAACAAT TATATCAATA ACCAGCGCAA ACAATTAAAG
ATAGCAAAAG GTCACGAAGA TTACGTTTTC CTAAACAGAA GAGGGAAACA ACTTACTCGC
GCAATGATAT TTACTATTGT AAGACAAGTA GCTGAAAACA TAGGATTACA GAAGACCATT
AGCCCACATA CTTTCAGACA TTCTTTTGCA ACACACCTAT TGGAGAACGG TGCGAATCTG
CGTGCCATAC AGATGATGTT AGGTCACGAG AATATTACTA CCACAGAAAT ATACGTACAC
GTAGAGAAGT CATATTTGAG GGAAGCTTTG GTGAAATACC ACCCACGCCA TAAAATGAGC
TTTACCCAAT AG
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| Protein sequence | MWRKVNTDYQ NYLRLQRGLS QNTVVSYGLD IEKLIGYLEK YNITEPPDTI QVDTLRQFVY
EVSKELNARS QARLISALKS FFKFMISEKG REDFPMSLID SPKIGVKLPD TLSLKEIDAM
LASIDLSTDE GHRNKAIIET LYGCGLRVSE LVSLRLSDLF FEEDFIRVMG KGSKQRLVPI
ESYTQKQINN YINNQRKQLK IAKGHEDYVF LNRRGKQLTR AMIFTIVRQV AENIGLQKTI
SPHTFRHSFA THLLENGANL RAIQMMLGHE NITTTEIYVH VEKSYLREAL VKYHPRHKMS
FTQ
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