Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0378 |
Symbol | |
ID | 8366784 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 480721 |
End bp | 482613 |
Gene Length | 1893 bp |
Protein Length | 630 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644982799 |
Product | ABC transporter related |
Protein accession | YP_003140502 |
Protein GI | 256819223 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGAACG TTCACAACCT ATCTGTTTCT TTTCAGGGCG AGTACCTCTT TGAGGACGTT GCTTTTATGC TGAATGCGGG CGACCGTGTG GGGCTTATTG GCAAGAACGG AGCGGGGAAA TCGACGATGC TCAAATTGCT TTCACGCGAA CTTAAACCCG ATACCGGAGG CATTGCTACC GATAAAGATG TACGCATCGG ATTTCTGAAA CAGGATATTG ATTTTGTGAA AGGACGTACC ATTTTGGAAG AAGCCTATCA GGCATTTACT GAGATTAAGG CTTTGGAACG TCAGTTGGAC GATATTCATC ACCAGATAGA AACCCGCACT GATTACGAGA GCGAGGCGTA CCACGATTTG CTTGATAAAC TCAGCGACTA TACGCATCGT TTTGACCTTA TAGGGGGATA CCAATACCAA GGAGAAACCG AGAAAGTGCT ATTGGGGTTG GGCTTTGAGC GGACTGATTT CGACAAGCTC ACCGACAGCT TTTCGGGCGG GTGGCGTATG CGTATAGAGT TGGCAAAACT GCTGTTGCAG AACAACGATA TATTGCTATT GGACGAGCCT ACGAACCACT TGGATATAGA GTCGATTATT TGGTTAGAAC AGTTCCTCTC TACTTATAGC GGGGCGGTGG TAATTGTATC GCACGACAGA ATGTTTTTAG ACAATGTGAC CAATCGGACG ATTGAGATTT CGATAGGCAA AATATACGAT TACCCGAAGC CTTACACTCA GTTTTTGGAA CTGAGAAAAG AGATGCGCGA ACTGCAACTC GCCTCACAAA AGAACCAAGA AAAGAAGATA CAACACACTG AAAAGCTCAT CGAAAAATTC CGCGCCAAAG CTACCAAAGC CTCAATGGCA CAGTCGCTTA TCAAGAAGTT GGACAAGATA GAGCGCATAG AGGTAGACGA GGAAGACAAT GCGGTGATGA ACGTGCGTTT CCCCGTATCG GTAACGCCAG GGAAGGTGGT GCTGGAAATA GACGATGTAT CGAAAAGTTA TGGTGAAAAA GAGGTGCTCA GCCACGTGAG TTTGCTTATA GAACGAGGCA GCAAAGTAGC TTTTGTGGGA CAAAACGGAC AGGGGAAAAC GACCCTCGCC AAGATGATAG TGGGCGAAAT ACCCTATGAA GGAACTATCA GGCTGGGGCA CAATGTACAG TTGGCTTACT TTGCTCAGAA CCAAGCCGAC TACTTAGATG GAGAACTCAC CGTGCTTGAT ACGATGTTTA ATGCAGCTAA CGACAGCAAT CGCACTAAAA TACGCGATAT ACTTGGGGCT TTTCTCTTCC GTGGCGATGA GGTAGACAAG AAAGTGAAAG TACTTTCGGG AGGGGAGCGC AACCGTTTGG CATTGGCAAA GATGCTCCTT TCGGACTTTA ACGTAATGGT GATGGACGAG CCTACGAACC ACTTGGATAT CAAATCGAAG AACGTACTCA AACAAGCCTT ACAGCAATTT GAAGGGACGC TCATTATTGT GTCGCACGAC CGCGATTTCT TGCAAGGGCT CACCGATAAG GTATACGAGT TTAAGAACAA ACATCTGAAA GAATATCTTG GGGACATCGA TTTCTTCCTC GAACAACGTG CTGCCGTTAA TTTTAGAGAG ATAGAACAGC AGAGCAAAAG CACTCCTGTA CAGGTAGAAA AAGAACCGCA GAAAGAAGAA AAACTCTCGT TTGAGGAACA GAAACAGCAG AAAGCCATTC AGAATAAGCT CAACAAGATA GAGAAGAACA TTACCGCTCT TGAAGAAGCG CTTAAAGCGA TGAATGAGCA GATGGGACAA GGCGTACAGA ACGATGCTTT TTACAAGGAA TACGAACAGA AAAAACAGCA GTTGGAAGAT TTAATGACCG AGTGGGAATT ATTAATGAGT TAA
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Protein sequence | MLNVHNLSVS FQGEYLFEDV AFMLNAGDRV GLIGKNGAGK STMLKLLSRE LKPDTGGIAT DKDVRIGFLK QDIDFVKGRT ILEEAYQAFT EIKALERQLD DIHHQIETRT DYESEAYHDL LDKLSDYTHR FDLIGGYQYQ GETEKVLLGL GFERTDFDKL TDSFSGGWRM RIELAKLLLQ NNDILLLDEP TNHLDIESII WLEQFLSTYS GAVVIVSHDR MFLDNVTNRT IEISIGKIYD YPKPYTQFLE LRKEMRELQL ASQKNQEKKI QHTEKLIEKF RAKATKASMA QSLIKKLDKI ERIEVDEEDN AVMNVRFPVS VTPGKVVLEI DDVSKSYGEK EVLSHVSLLI ERGSKVAFVG QNGQGKTTLA KMIVGEIPYE GTIRLGHNVQ LAYFAQNQAD YLDGELTVLD TMFNAANDSN RTKIRDILGA FLFRGDEVDK KVKVLSGGER NRLALAKMLL SDFNVMVMDE PTNHLDIKSK NVLKQALQQF EGTLIIVSHD RDFLQGLTDK VYEFKNKHLK EYLGDIDFFL EQRAAVNFRE IEQQSKSTPV QVEKEPQKEE KLSFEEQKQQ KAIQNKLNKI EKNITALEEA LKAMNEQMGQ GVQNDAFYKE YEQKKQQLED LMTEWELLMS
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