Gene Coch_0376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0376 
Symbol 
ID8366782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp477587 
End bp479248 
Gene Length1662 bp 
Protein Length553 aa 
Translation table11 
GC content39% 
IMG OID644982797 
Productmembrane bound O-acyl transferase MBOAT family protein 
Protein accessionYP_003140500 
Protein GI256819221 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1696] Predicted membrane protein involved in D-alanine export 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.107877 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGATT TCTTTAAAAA CTTCTTTACC TTTGAGTCGG CTCACCCACT TACTTTTGTA 
CGGATAGACT TTTGGATATT CTTTGCTTTA GTATATGCGG TGTTTGTGCT CATCTATAAG
CGTAAGCACG TGCGCAACTT GTTTTTGTTG CTTGCCAGCT TTTACTTCTA TTACAAGGCA
AGTGGGCTTT TTGTATTGTT ATTGGTATTT AGTACTGTTA CTGACTTTTA TTTGGGGCAT
TATATCTATA ATCAACAAGA AGAGCGCCGA CGCAAAATAG GGGTTACTAT TAGCGTTTGT
GTGAACTTAT TAGTACTTAG TTATTTTAAG TATGCTTATT TCTTTACTGA TACTTACAAT
GCGCTGTTTC ACACTCATCA CCAAACCTTT AACTATTTAG CCTATTGGGC AAATGGGTTT
GACTATAACG GATACTTTTC AGTTGATAAA ATTATATTGC CCGTAGGTAT TTCTTTCTAC
ACTTTTCAGA CCATCAGCTA TACAGTGGAT ATTTACCGCA GAAAGGTTGC ACCACTGAAA
TCGATATTAG ACTTTGGTTT TTATGTGAGT TTCTTCCCTC AGTTAGTAGC AGGTCCTATT
GTACGTGCAG AAGAGTTTGT ACCTCAAATT CTCAAAAAAA CAGAGATTAG CAAAGAAGAG
TTTAATAAGG CGATATTCCT TATTCTTAAA GGACTTATCA AGAAGATGAT ATTTGCTGAT
TTTATTGCGT TGCACTTTTT GGATAAGGTA TTTGATGCTC CTGAAATGCA CTCGGGCTTT
TCTAACTTAT TAGCTCTGAT AGGTTACTCG CTCCAAATAT ACGGTGATTT TTCTGGCTAT
ACCGATATAG CCATAGGGGT AGCGCTATTG ATGGGTTTCC ATTTGCCTGT AAACTTCAAT
TCACCTTATA AGGCTTTGAA CTGTGGGGAC TTTTGGAAAC GCTGGCACAT CTCGCTTTCT
ACTTGGTTGA AGGACTATTT GTATATTCCG TTAGGAGGTA ACCGCAATAG CACCTTAGGA
ACTTTTGTGT TTTCCTTGCT TTTTGTAGTG ATATTGGTAG TAGCGATTGG TAACCTCGCC
TTTACTTTTA TCACAGGGGG ATTGCTGATA GCAGGTGCGG TAGTAGCTTT TTATTACAAA
CCTTTTGAGC GTTACTTGAC TACCAATATC AACATTATGC TCACGATGCT TATTGGAGGA
TTGTGGCACG GAGCTTCGTG GAAGTTTGTT ATATGGGGTG GATTGAACGG TTTGGGTGTA
GTCGCTTATA AGTATTGGCG CAAGGTAAGT CCGTACGAGC AAAGTAAGCT GTGGATTACT
CGCGCTTGGA AGATAGTCTT TACCTTTGCT TTTATTACCT TTACACGCAT ATTTTTCCGA
GGTAATGATA TGGAGAGCAT AAACTTATGG TTCGCACAAG TGGCGAACAA TATGAGTTGG
GATACTGCTA CCGAAGTGAT TAGACATAAC AATATTCCAT TAGGCGTTAT CTTGATTGGT
TATATTACCC ATTGGCTACC ACAGCATTGG AAAGACTATG TGGAACACGT GTTTGCCGAG
AGCCATTACG CTGTGAAAAT AGCGATAGTC TTAGTAGTAG TGCTCATTTG CTATCAGGCT
TATTCTACCG ATATTCAGCC GTTTATTTAC TTCCAATTTT AG
 
Protein sequence
MIDFFKNFFT FESAHPLTFV RIDFWIFFAL VYAVFVLIYK RKHVRNLFLL LASFYFYYKA 
SGLFVLLLVF STVTDFYLGH YIYNQQEERR RKIGVTISVC VNLLVLSYFK YAYFFTDTYN
ALFHTHHQTF NYLAYWANGF DYNGYFSVDK IILPVGISFY TFQTISYTVD IYRRKVAPLK
SILDFGFYVS FFPQLVAGPI VRAEEFVPQI LKKTEISKEE FNKAIFLILK GLIKKMIFAD
FIALHFLDKV FDAPEMHSGF SNLLALIGYS LQIYGDFSGY TDIAIGVALL MGFHLPVNFN
SPYKALNCGD FWKRWHISLS TWLKDYLYIP LGGNRNSTLG TFVFSLLFVV ILVVAIGNLA
FTFITGGLLI AGAVVAFYYK PFERYLTTNI NIMLTMLIGG LWHGASWKFV IWGGLNGLGV
VAYKYWRKVS PYEQSKLWIT RAWKIVFTFA FITFTRIFFR GNDMESINLW FAQVANNMSW
DTATEVIRHN NIPLGVILIG YITHWLPQHW KDYVEHVFAE SHYAVKIAIV LVVVLICYQA
YSTDIQPFIY FQF