| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0371 |
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| Symbol | |
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| ID | 8366777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 469343 |
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| End bp | 473800 |
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| Gene Length | 4458 bp |
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| Protein Length | 1485 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644982792 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_003140495 |
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| Protein GI | 256819216 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACTTAA TATTCGATAC TGAAACCACG GGTTTACCCC GCCGTTGGGA TGCCCCCCTT
ACTGATAGTG ACAACTGGCC TCGCGCCGTG CAGATTGCTT GGCAATTGCA CGATGAGTGG
GGCGCACTCA TTGAGCATCA GGACTTTTTG ATAAAGCCCG ATGGCTTCGA CGTGCCTTAT
GATGCTGAAA AAGTACACGG TATTTCTACC CAATTAGCAG AAGCACAAGG CCTGCCTATC
GCTGAGGTGT TCAAAGCTTT CAACGAGGCA CTCAGCAAAG CGCAATACGT GGTGGGACAA
AATATAGGCT TCGATATCAA TATTATGGGG GCTGAGTTTT ACCGCTATGG GGTGGAGAGT
CCGCTTACGC AGATGCCTGT AATCGACACT TGTACTGAGG CAACTGCCAA TCTATGCCAG
ATAGCTGGTG GAAAAGGAGG TCGTTATAAG TTGCCTACCC TCACCGAGTT GCACTCTTTC
CTCTTTGGTG TACCATTTGC CGAGGCGCAC AATGCCACTG CCGACGTGGA AGCAACTACA
CGCTGTTTCT TTGAATTGAT ACGTCGTGGT GAAGGCTTCC AAGAAGGTAC TTTCAGTAGC
GACTATATCA AAGAATTTCA AGGGCATCAC ACCTCACCTA TAGGGCTTAT CGGACTTACA
CACGTGAACC TCAAAGAGGC TTCTGATGCC TTGCGAAAAA GCAGTAGCAC TGTACAAACT
ACCGAACCTC ACGTCGATGC TTCACTGTTA GAAAATGCGG TATTCGCCCA CCTGCACAAC
CATACACAAC ACTCTATATT ACAATCTACT ACGTCTATAA AAGACCTCGT AAAAATTACT
GCTAAAGAAA AGATGCCTGC CGTGGCACTT ACCGATAGTG GCAATATGAT GGCTGCCTTC
CACTTTGTAC AAGCTGTACA AGCTCATAAC AAAGAGGCAG AAGCTAAGAA CAAGGAGGCA
GAAGAAAAGG GCGAAACTCC TACCGAAACG CTTATCAAGC CTATTATAGG TTGTGAGTTC
AATATCTGCG AAAATCACTT AGATAGAAGC CGACAAGACA ACGGCTACCA AGTGGTGATT
TTAGCTAAAA ACAAACAAGG TTATCACAAT CTTACCAAAA TGGCTTCTAT TGCTTCTACC
AAAGGCTTTT ACTATGTACC TCGTATCGAC AAAGTGATTG TAGAGCAGTA CAAAAGCGAC
CTAATAGTAC TCTCAGGGGG TATGAATGGC GAAGTGCCAT CAAAAATACT GAATATCGGT
ACAAAGCAGG CTGAAGAGGC GCTCTTGTGG TGGAAAGAGC AGTTCGGCGA GGATTTCTAT
TTAGAGGTGA TGCGCCACAA CCAAGAAGAT GAAAACCGCG TAAACGAAAC CCTTGTAGAG
TTTTCTAAGA AATATGGGGT GAAACTCATT GCTACTAACA ATACTTTCTA TCTACATAAA
AAAGATGCCA ATGCCCACGA TATTCTGTTG TGTGTGAAAG ACGGCGAAAA ACAGAAAACA
CCTATCGGGC GCGGTCGTGG CTATCGTTTT GGGATGCCTA ACAATGAGTA TTATTTCAAA
ACCTCAGCCG AAATGAAGGC GCTCTTCAAG GATATTCCTG AGGCGATTCT CAATATTCAA
GAAATTATCG ACAAGGTAGA ACCTTATGGC TTGGCGCGTG ATATTCTCTT GCCTAAGTTT
GATATCCCCG AAGAATTTCA GGTGGAAGAA GACCCTACGG GCAAGAAAGG AGAAAACAAC
TATTTGCGTC ATCTTACTTA TGAAGGGGCT AAACGCAAAT ACCCCGAAAT TACCGATGAG
GTGAGGGAGC GTTTGGATTT CGAGCTTTCT ATTATTGAAA AAACGGGTTA CCCAGGTTAC
TTTTTGATAG TACAAGATTT TATTGCCGCA GCGCGACGTA TGAACGTATC GGTAGGTCCT
GGACGAGGTT CGGCTGCGGG CTCGGCAGTG GCGTTTTGTT TGGATATAAC CAATATGGAC
CCAATTAAGT ACGACCTGCT CTTTGAGCGT TTCCTTAACC CCGACCGTGT GTCAATGCCC
GATATCGATA TCGACTTCGA GGACTCTGGG CGCCAAGATG TCATCAACTA TGTGATTGAT
AAGTATGGCG AGAGTCAGGT CGCACGGATT ATCACCTATG GAAAAATGGC TGCTAAATCG
GCTATCAAAG ATACGGCTCG TGTATTAGAT GTGCCTCTTC AAGAGTCAAA TAGATTAGCA
GGATTGGTGC CTAATGGAGT GTCGTCTTTA GGAAAGATGT TCGGTTGGGA CGATAAAACC
CTCAAAGAAA AAGTGCGTAG TGAAGAACTG CCAAAAGTAG ACGAACTGAA ACGTCTTTTA
GCAGGAGAAG GGGAGGAGGA GAGTACTCAA ACCATTCAGC AGGCAAATAT TATTGAAGGT
TCGGTGCGCA ACACTGGTAT CCACGCTTGT GGGGTGATTA TTACCCCCGA TGATATCACC
AACTTTGTGC CAGTAGCTTT AGCCAAAGAT TCAGACTTGT TTGTGACTCA GTTCGATAAC
TCGGTAGTAG AGAGCGCAGG ATTGCTGAAA ATGGACTTCT TGGGGCTCAG TACCCTTACC
CTTATCAAAG ATACTATTGA AAATATCAAA CAAACTCATA ATATAGAGCT GGATGCAGAG
GCTTTTCCAC TTGACGATAA AAAGACTTAC GAACTCTTCC AACGCGGTGA AACGGTAGGG
ATTTTCCAAT ACGAGTCTAC CGGTATGCAG AAGTATATGC GAGAGCTTAA ACCTACCGTC
TTTGCCGACC TGATAGCGAT GAATGCCCTT TACCGTCCAG GGCCATTGGA ATATATACCG
AGCTTTATCA AGCGGAAACA CGGCATTGAG TCTATTGAGT ACGACCTCCC CGATATGGAG
GAATACCTCA AAGAGACTTA TGGGATTACC GTTTATCAAG AACAGGTGAT GTTGCTATCG
CAGAAGTTGG CAGGCTTTAC CAAAGGTGAA GCCGACGTGT TGCGTAAGGC GATGGGTAAG
AAACAAATAG CTGTGCTAGC CAAGATGAAG CCTAAGTTTA TTACCCAAGC CTCCGAAAAA
GGTCACGATG CCCAAAAACT CGAAAAGATA TGGGCAGACT GGGAGAAATT TGCCGCTTAT
GCATTCAACA AATCGCACTC TACCTGCTAT GCGTGGGTGG GTTACCAAAC TGCCTACCTA
AAAGCCAATT ACCCTGCCGA GTATATGGCA GCGGTACTCT CTAACAATAT GAACGACATC
AAAACGATTA CTTTCTTCCT CGAAGAGTGC CACCGAATGG GGGTCAAAGT ATTACCTCCT
GATGTAAATG AATCGTTGTA CAAATTTACC GTAAATAAAA ACGGCGATAT ACGCTTCGGT
ATGGGGGCTG TAAAAGGGGT AGGAAAAGCA GCCGTCGATA CGATTGTAGA ACAACGCCAA
GAGCGTCCTT ATACCTCTAT TTTCGATTTG GCAAAACGCG TAGATTATAA GAGTATCAAC
AAAAAAGCCT TTGAAAGTAT CGCTTTGGCA GGAGGTTTTG ACTCGTTCAC CAATGTACAC
CGTGCTCAGT ACTTCCACGC CGAAGCCGAT GGTATTCCAT TCCTCGAAAA AGCCATTCGT
TTTGGTACTA AATACCAAGA GAGTAAGAAC TCTGCCCAAA TGAGTCTGTT TGGTGGTGAG
AGTGAAGTAG ATATTCCTGA ACCTGCTGTG CCTAAATGTG AAACGTGGGG TAACCTCGAG
CAGTTGCGCC GTGAGAAGGA GGTGGTAGGT ATCTATATCT CAGGGCACCC GCTCGACGAT
TTTAAGCACG AGTTACAAAA CTTTTGCAAT ATCAGTCTAT CGGAATTGCA AGACTTACAA
CCTTTTATTA ACCGTGAACT CACTGTAGCG GGTATGGTAG CTGACCTGCA ACATCGTACG
GCTAAGAACG GAAAAGGTTA CGGCTTTTTT ACTCTTGAGG ATTACGACGG CTCTTACGAG
TTTAAACTCT TTGGAGATGA TTATTTGAAC TATCAGAAAT ATATGGTACC AGGGGCGTTT
TTGTATATCA AATTTAAGGT GGTAGAAGGA TTTCTCAATA GGGAAACCAA CCAAAGAGGT
GAACCTCGGA TACAGTTTCT ACAGATGATG CAGTTGCAAG ATGTGATGGA AACCCTCTCT
AAAAAACTTA CTTTACACGT GAATATAGAG GAGATTAACC AAGATTTGAT TGCAAAATAC
AAAGATTTAC TACAAAAGCA CAAAGGGAAA CAGTCTATTT ACTTTGTTGT GCACCATCAC
AATGAAAATA TTCACCTAAA TATGGAAAAT GGTAATCTAA AGGTGGCGAT TACTAAATCT
TTTTTAGATG ATTTAGACGC TCTATTTGCA AAATATCATC TCAATGACCG CAGAATGGAG
AAAATAGTTG CTAAAAAGAC AGAAGATACT CACGACGACG AGGAAATGGC AATGGAGGAT
TTGGGATTAT CCGAGTAG
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| Protein sequence | MYLIFDTETT GLPRRWDAPL TDSDNWPRAV QIAWQLHDEW GALIEHQDFL IKPDGFDVPY
DAEKVHGIST QLAEAQGLPI AEVFKAFNEA LSKAQYVVGQ NIGFDINIMG AEFYRYGVES
PLTQMPVIDT CTEATANLCQ IAGGKGGRYK LPTLTELHSF LFGVPFAEAH NATADVEATT
RCFFELIRRG EGFQEGTFSS DYIKEFQGHH TSPIGLIGLT HVNLKEASDA LRKSSSTVQT
TEPHVDASLL ENAVFAHLHN HTQHSILQST TSIKDLVKIT AKEKMPAVAL TDSGNMMAAF
HFVQAVQAHN KEAEAKNKEA EEKGETPTET LIKPIIGCEF NICENHLDRS RQDNGYQVVI
LAKNKQGYHN LTKMASIAST KGFYYVPRID KVIVEQYKSD LIVLSGGMNG EVPSKILNIG
TKQAEEALLW WKEQFGEDFY LEVMRHNQED ENRVNETLVE FSKKYGVKLI ATNNTFYLHK
KDANAHDILL CVKDGEKQKT PIGRGRGYRF GMPNNEYYFK TSAEMKALFK DIPEAILNIQ
EIIDKVEPYG LARDILLPKF DIPEEFQVEE DPTGKKGENN YLRHLTYEGA KRKYPEITDE
VRERLDFELS IIEKTGYPGY FLIVQDFIAA ARRMNVSVGP GRGSAAGSAV AFCLDITNMD
PIKYDLLFER FLNPDRVSMP DIDIDFEDSG RQDVINYVID KYGESQVARI ITYGKMAAKS
AIKDTARVLD VPLQESNRLA GLVPNGVSSL GKMFGWDDKT LKEKVRSEEL PKVDELKRLL
AGEGEEESTQ TIQQANIIEG SVRNTGIHAC GVIITPDDIT NFVPVALAKD SDLFVTQFDN
SVVESAGLLK MDFLGLSTLT LIKDTIENIK QTHNIELDAE AFPLDDKKTY ELFQRGETVG
IFQYESTGMQ KYMRELKPTV FADLIAMNAL YRPGPLEYIP SFIKRKHGIE SIEYDLPDME
EYLKETYGIT VYQEQVMLLS QKLAGFTKGE ADVLRKAMGK KQIAVLAKMK PKFITQASEK
GHDAQKLEKI WADWEKFAAY AFNKSHSTCY AWVGYQTAYL KANYPAEYMA AVLSNNMNDI
KTITFFLEEC HRMGVKVLPP DVNESLYKFT VNKNGDIRFG MGAVKGVGKA AVDTIVEQRQ
ERPYTSIFDL AKRVDYKSIN KKAFESIALA GGFDSFTNVH RAQYFHAEAD GIPFLEKAIR
FGTKYQESKN SAQMSLFGGE SEVDIPEPAV PKCETWGNLE QLRREKEVVG IYISGHPLDD
FKHELQNFCN ISLSELQDLQ PFINRELTVA GMVADLQHRT AKNGKGYGFF TLEDYDGSYE
FKLFGDDYLN YQKYMVPGAF LYIKFKVVEG FLNRETNQRG EPRIQFLQMM QLQDVMETLS
KKLTLHVNIE EINQDLIAKY KDLLQKHKGK QSIYFVVHHH NENIHLNMEN GNLKVAITKS
FLDDLDALFA KYHLNDRRME KIVAKKTEDT HDDEEMAMED LGLSE
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