| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0370 |
|---|
| Symbol | pyrB |
|---|
| ID | 8366776 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | - |
|---|
| Start bp | 468301 |
|---|
| End bp | 469224 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 644982791 |
|---|
| Product | aspartate carbamoyltransferase catalytic subunit |
|---|
| Protein accession | YP_003140494 |
|---|
| Protein GI | 256819215 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0540] Aspartate carbamoyltransferase, catalytic chain |
|---|
| TIGRFAM ID | [TIGR00670] aspartate carbamoyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0685539 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGCAT TGAGCGTTAA TCACCTGTTG GGCATTAAGT ATATCACCGA AAAGGATATA
CAGTTGATAT TTGAAACAGC AGACCACTTC AAGGAGGTTA TTAACCGTCC TATTAAAAAA
GTGCCTTCGT TGCGCGATAT TACTATTGCC AATCTCTTCT TCGAGAATAG TACGCGCACT
CGTCTTTCCT TTGAATTGGC AGAAAAACGT CTTTCTGCCG ATGTGATTAA CTTTTCGGCT
TCTCAATCAT CGGTAGCCAA AGGGGAAACC TTAGTAGATA CCGTGAACAA TATTCTCTCG
ATGAAAGTGG ATATGGTAGT GATGCGTCAC CCGAACCCTG GTGCGGGAGT CTTCCTCTCA
CAACACGTGA AAGCCTCAAT TGTAAACGCT GGCGATGGAG CTCACGAACA CCCTACACAA
GCACTTTTAG ACTCATATTC TATACGCGAA CGTTTAGGAG ATGTAGCAGG TAAAAAAGTA
GTGATAGTGG GAGACATACT ACACTCGCGC GTGGCACTTT CGAACATCTT TGCACTCCAC
AAACAAGGAG CTGAAGTGAT GCTATGTGCG CCTCAAACGC TTATTCCTAA ATACATTCAT
AAATTGAACG TGAAGGTAGA AAGCAATTTG CGCAAGGCTT TGAACTGGTG TGATGTGGCT
AATATGTTGC GTATCCAAAA TGAGCGACTC GACATCAGTT ATTTTCCTTC TACTCGCGAA
TATGTACAAC AATACGGACT CACCAAAGAG CTGTTGGATA GCCTTGACAA AGAAATAGTG
ATTATGCACC CAGGACCTAT CAACCGAGGG GTAGAAATTA CCAGCGAAGT AGCTGATAGC
TCCCAATCGA TTATCTTACA ACAAGTAGAA AATGGGGTAG CCATACGAAT GGCAGTGATT
TATTTGTTGG CGAGCAAGAT TTAA
|
|---|
| Protein sequence | MSALSVNHLL GIKYITEKDI QLIFETADHF KEVINRPIKK VPSLRDITIA NLFFENSTRT
RLSFELAEKR LSADVINFSA SQSSVAKGET LVDTVNNILS MKVDMVVMRH PNPGAGVFLS
QHVKASIVNA GDGAHEHPTQ ALLDSYSIRE RLGDVAGKKV VIVGDILHSR VALSNIFALH
KQGAEVMLCA PQTLIPKYIH KLNVKVESNL RKALNWCDVA NMLRIQNERL DISYFPSTRE
YVQQYGLTKE LLDSLDKEIV IMHPGPINRG VEITSEVADS SQSIILQQVE NGVAIRMAVI
YLLASKI
|
|---|
| |