Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0363 |
Symbol | |
ID | 8366769 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 456142 |
End bp | 456900 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644982784 |
Product | hypothetical protein |
Protein accession | YP_003140487 |
Protein GI | 256819208 |
COG category | [S] Function unknown |
COG ID | [COG3022] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000177188 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATCG TTATCTCTCC CGCCAAAACC ATTAACGAAA CATCAGCCCT ACCTACTACC GTACACTCTT CGGCTATTTT CCCAAAGGAA ATTGGCGAGG TAAGCACTGC CCTTAAAGCA CTCTCTCCAA AGCAACTTAT AAACCTGATG CATATCTCCC AAAAGCTCGC CGACCTGAAT TGGCAACGAC ACCAACAGCT CTCATTGCCC TTTACCCCAC AAAATGCGCG TCCGGCGCTC TTTGCTTACA ATGGCGATGT GTATGAGGGA CTCGATGCTT ATTCACTCTC TAAAATGCAA ATTGATAAGT TACAAAGGTC TTTGCGTATT CTCTCTGGCT TATACGGACT GCTTAAACCC TTAGACCTTA TCGCGCCTTA TCGGTTGGAA ATGAGCATCA AACTACCCGT AGGGAAGGCT ACAAATCTAT ATGCTTTTTG GAAAGACAAA ATCACTCACG CATTGAACAA CGAATTACAA GAAGGAGAAT TGTTTATCAA TCTCGCCAGT GAAGAATATT TTAAGGCAAT TGATACGACA AAGCTAAAAG TGCCCGTGAT TACACCTATT TTCAAAGATT ATAAAGGAGA TACACTAAAA GTCGTTAGTT TTTATGCGAA GAAAGCGCGG GGTCGTATGG TGCGTTTTTT GGCAGAAAAT GAGATTCGCT CAGTAGAAGA TTTGAAAGGG TTTAACGCTG ATGGATATGC GTTCTCAGAA CAGTTCTCGA AAGGAAATAC ACTTGTTTTT ATTAGATAA
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Protein sequence | MKIVISPAKT INETSALPTT VHSSAIFPKE IGEVSTALKA LSPKQLINLM HISQKLADLN WQRHQQLSLP FTPQNARPAL FAYNGDVYEG LDAYSLSKMQ IDKLQRSLRI LSGLYGLLKP LDLIAPYRLE MSIKLPVGKA TNLYAFWKDK ITHALNNELQ EGELFINLAS EEYFKAIDTT KLKVPVITPI FKDYKGDTLK VVSFYAKKAR GRMVRFLAEN EIRSVEDLKG FNADGYAFSE QFSKGNTLVF IR
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