Gene Coch_0360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0360 
Symbol 
ID8366766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp452877 
End bp453689 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content36% 
IMG OID644982781 
ProductZeta toxin family protein 
Protein accessionYP_003140484 
Protein GI256819205 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0194178 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTACT ATAAAGTTGA GGATATTTTT GAAAGAGAGA AAACAGACCT TTTATCAGGT 
TTAAAATCTC AAGAAAATCC TATTGCCTTT ATATTAGGAG GACAGCCTGC ATCAGGAAAG
AGTGGGCTAG CAAAAGCTAT CCTAAGACAA TTTCCTGACA AAGATTTTCT TTTTGTAAAT
GGAGATATTT ACAGAGAGTT TCATCCTAAG GCTAATGAGC TTATAAGATA TCCTGAGAGA
TACTCAACAG AGACGCAAAT ATTCTCTAAC TTTTTTACAG AAGCACTCAT ACAAGAGGCT
ATTATCCATA AATACAATAT CATTGTAGAG GGTACTATGC GCAATCCTGA AGTACCTTTG
CGTACGGCAT TGGCTTTTAG AGAAAACGGT TTTAATGTAG AAGCTTTTGC GATTGCAGCT
CCTGCACTCT TTACCGAATT AGGTTTTTAT TTGCGCTATC AAGAAGAAAA AGATTTTCAA
GGATATGGGC GATTGTCAGA TAAAAATTCC CACGACAGAG CAGTAGAAGG CTTACTTCAC
TCATTAGACC GTTTGTACAA CGAAAAGGCA GTAGATAAAA TACATCTTTA CAATTATCAA
GCTGAAAAAC ATTTAGAAAC TTTCTCATTG AGGGAACAGC AATGGGATAT AAATATTTTG
CCTTCTACAG AAGTTATAAA AGCAAGGAGA GAACAATTTC AGGATAAGAC ACTTCGTTTG
CAACTGATAG CACGAGCTTA CTCTGTTATA CCGCGAATGT CGCCACCTAT AAAAGCTATA
GTAGAAGCAC TTATAGAGCA GTTAAAAGAC TAA
 
Protein sequence
MEYYKVEDIF EREKTDLLSG LKSQENPIAF ILGGQPASGK SGLAKAILRQ FPDKDFLFVN 
GDIYREFHPK ANELIRYPER YSTETQIFSN FFTEALIQEA IIHKYNIIVE GTMRNPEVPL
RTALAFRENG FNVEAFAIAA PALFTELGFY LRYQEEKDFQ GYGRLSDKNS HDRAVEGLLH
SLDRLYNEKA VDKIHLYNYQ AEKHLETFSL REQQWDINIL PSTEVIKARR EQFQDKTLRL
QLIARAYSVI PRMSPPIKAI VEALIEQLKD