Gene Coch_0345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0345 
Symbol 
ID8366751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp431898 
End bp433127 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content44% 
IMG OID644982766 
ProductHI0933 family protein 
Protein accessionYP_003140469 
Protein GI256819190 
COG category[R] General function prediction only 
COG ID[COG2081] Predicted flavoproteins 
TIGRFAM ID[TIGR00275] flavoprotein, HI0933 family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACGACC TTCTTATTAT CGGTGGAGGA GCTGCTGGCT TCTTCACCGC TATTAATACT 
GCTGAAAAAC ACCCTAACTT TAAGATTGCT ATCCTCGAAA AAAGCAAAGA AGTACTCCAT
AAAGTGCGCA TTTCAGGCGG AGGGCGTTGT AACCTCACCA ACGCTACTTT TACTCCCCAA
GAACTCGTAA AGAACTATCC TCGTGGCAGT AAGGAACTCC TCAGTCCCTT CCTCCGTTTT
ATGTGTGGTG ATACAATGGA CTGGTTTGAA GCTCACGGTG TCCCTCTCAA AACTGAAGCT
GATGGTCGTG TATTTCCTAT TTCTAATACT TCGGAGAGCA TTGTAAATTG CTTCCTCAAC
GAAATAAAAA AACACCATAT AGAGCTCTTC GCTGAGCAAA ATGTACAAGC CTTCTCTCCT
ACTCCCGAAG GTTGGCAAGT AGGTACGCCC AAACAGACCT ACATTACTCG AAATGTAGTC
ATTACCACCG GCAGTAATCC TAAAATATGG CAATTGTTAG CTAATTTGGG GCATACTATC
ATACCACCAG TCCCCTCGTT GTTTACCTTT CATACTTCCA CCCAATGGAC AAAAGAACTA
TCGGGTATTG CTGTAAATGC TTCTGTACGT TTGCTTAGCA AAGAAGGAAA ATCACTAAAA
ATAACTGAGA CTGCTCCGCT ACTCTTCACC CATACGGGTT TTAGCGGACC TGCGGTATTG
CGCGCCTCGG CTTGGGGGGC TCGTGTGCTA GCTGAATGTA ACTACCAATG CTTAATGGAA
GTAAATTTCA CCGCTAACCT CACAGAGGCG CTTTCTTATG ACGAAACGCT CTCTGTTCTC
CAAGAATTTA AACAACACAA CGGACGCAAA GCTATACAAA GCTTCTCACT TTTTGAACTC
CCCAAACGCT TATGGTCTGC TCTTTTAGAA AATGCAGGTA TCGCTCCTGA ACAAGTGTGG
GCAGAACTCA ACAAACCACA ATTGCGCCGG CTGGCTGAAG CTCTTACCCA ATATCGTTTT
CCCATAGAGG GCAAAGCTAC CTTCAAAGAA GAATTTGTAA CAGCAGGTGG TGTAAAACTC
TCTGAAATCA ACTTTAAGAC TTATGAGAGC AAGCTATACC CTCAGCTCTA TTTAGCAGGA
GAAGTACTCG ATATTGATGC TATTACTGGA GGGTTTAACT TCCAAAATGC GTGGACGGGT
GGTTATATCA TTGCAGAAAG TATTCAATAA
 
Protein sequence
MYDLLIIGGG AAGFFTAINT AEKHPNFKIA ILEKSKEVLH KVRISGGGRC NLTNATFTPQ 
ELVKNYPRGS KELLSPFLRF MCGDTMDWFE AHGVPLKTEA DGRVFPISNT SESIVNCFLN
EIKKHHIELF AEQNVQAFSP TPEGWQVGTP KQTYITRNVV ITTGSNPKIW QLLANLGHTI
IPPVPSLFTF HTSTQWTKEL SGIAVNASVR LLSKEGKSLK ITETAPLLFT HTGFSGPAVL
RASAWGARVL AECNYQCLME VNFTANLTEA LSYDETLSVL QEFKQHNGRK AIQSFSLFEL
PKRLWSALLE NAGIAPEQVW AELNKPQLRR LAEALTQYRF PIEGKATFKE EFVTAGGVKL
SEINFKTYES KLYPQLYLAG EVLDIDAITG GFNFQNAWTG GYIIAESIQ